DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shu and fkbp39

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_596694.1 Gene:fkbp39 / 2539812 PomBaseID:SPBC1347.02 Length:361 Species:Schizosaccharomyces pombe


Alignment Length:88 Identity:24/88 - (27%)
Similarity:42/88 - (47%) Gaps:3/88 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 NKARVSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTVVEGLEVAVRSMRPYEQAEFIISYKLL 166
            |..:|.:||.|..|.... ||.: .:|..|.|..|:|.|:.|.:|.|..|:...:.:..|...:.
pombe   274 NGKKVEMRYIGKLENGKV-FDKN-TKGKPFAFILGRGEVIRGWDVGVAGMQEGGERKITIPAPMA 336

  Fly   167 FGELGCPPRIKPKADALFKVEVI 189
            :|.... |.|...:..:|:|:::
pombe   337 YGNQSI-PGIPKNSTLVFEVKLV 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 24/86 (28%)
TPR repeat 218..257 CDD:276809
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
fkbp39NP_596694.1 FkpA <201..361 CDD:223619 24/88 (27%)
FKBP_C 272..358 CDD:278674 24/86 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0545
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.