DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shu and FKBP4

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_002005.1 Gene:FKBP4 / 2288 HGNCID:3720 Length:459 Species:Homo sapiens


Alignment Length:449 Identity:98/449 - (21%)
Similarity:161/449 - (35%) Gaps:126/449 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 DENIYKRITRTGHVDREAVPNKARVSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTVVEGLEV 146
            ||.:.|.|.|.| ...|......||.|.|:| |..:...|||||.|..||.|:.|:|.|::..::
Human    30 DEGVLKVIKREG-TGTEMPMIGDRVFVHYTG-WLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDI 92

  Fly   147 AVRSMRPYEQAEFIISYKLLFGELGCPPRIKPKADALFKVEVIDYS------------------- 192
            |:.:|:..|........:..:|..|.||:|.|.|..:|:||:.::.                   
Human    93 AIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTR 157

  Fly   193 ---------------------------------LIGDAKGID-------AIPQEDRDKFCVVY-- 215
                                             .||:.:.:|       ||.:.::.:..:||  
Human   158 GEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLK 222

  Fly   216 ----------------PKA---VDLHL----HGKDS----------------------VKLGRYQ 235
                            |.|   .:|||    ..|:|                      .|.|:|:
Human   223 PSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYK 287

  Fly   236 SAATAFERAVSSLNYCRMANDEEERKQTELLTTLNQNLMIVYNKMNKPKRACIMMKALRHLTMGN 300
            .|...:::.||.|.|....::||.:|...|....:.||.:.:.|:.....|.........|...|
Human   288 QALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNN 352

  Fly   301 PSCKALFQEGRALAALGEYNLARNAYLQAQAKQPANKEISDEIISMNKRISKYEEASRDIWARAF 365
            .  |.||:.|.|..|:.::.|||..:.:.....|.||....::....:||.:.....:.::|..|
Human   353 E--KGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 415

  Fly   366 SLKNSKSDVRKTPAQLEKEAK-EQDFNDKMEDLIRRFKNTSDQQVSFSRKSYSNAQFDA 423
                      :..|:.|.:|| |....|...|     ....::|.|.:..|.|..:.:|
Human   416 ----------ERLAEEENKAKAEASSGDHPTD-----TEMKEEQKSNTAGSQSQVETEA 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 32/92 (35%)
TPR repeat 218..257 CDD:276809 14/67 (21%)
TPR repeat 262..295 CDD:276809 5/32 (16%)
TPR repeat 304..329 CDD:276809 9/24 (38%)
FKBP4NP_002005.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
FKBP_C 43..134 CDD:306713 31/91 (34%)
FKBP_N <155..254 CDD:332399 12/98 (12%)
TPR_11 <250..>395 CDD:330823 32/146 (22%)
Interaction with tubulin. /evidence=ECO:0000250 267..400 30/134 (22%)
TPR repeat 274..301 CDD:276809 6/26 (23%)
TPR repeat 306..348 CDD:276809 8/41 (20%)
TPR repeat 353..381 CDD:276809 9/29 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..459 10/42 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0545
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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