DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and fkb-7

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_492792.1 Gene:fkb-7 / 172963 WormBaseID:WBGene00001432 Length:318 Species:Caenorhabditis elegans


Alignment Length:88 Identity:20/88 - (22%)
Similarity:36/88 - (40%) Gaps:17/88 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EPYTPQLLKNPLSYSD---LVKKGVEFEVDNSQQNHARDLGLD-SDSDSD-------YEDALDVD 59
            :||||::....|..::   |..|    ||.:.|:...::.|.. .:.|.|       |....||:
 Worm   182 KPYTPEIQFKFLDLNEDEQLTNK----EVQDFQKKMKKEFGKTWKNEDIDNVTAAGYYIKYFDVN 242

  Fly    60 GEEL--RSPWTYSFDELRALMSE 80
            |:.:  ...|....|....|:::
 Worm   243 GDGIVTEVEWLKIMDRDEKLIND 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735
TPR repeat 218..257 CDD:276809
TPR 230..>389 CDD:440225
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
fkb-7NP_492792.1 FKBP_C 86..179 CDD:459735
EFh_SPARC_EC <189..254 CDD:330171 14/68 (21%)
EF-hand motif 219..254 CDD:320009 7/34 (21%)
Blue background indicates that the domain is not in the aligned region.

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