DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and fkb-5

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001367683.1 Gene:fkb-5 / 171974 WormBaseID:WBGene00001430 Length:300 Species:Caenorhabditis elegans


Alignment Length:120 Identity:32/120 - (26%)
Similarity:55/120 - (45%) Gaps:7/120 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DELRALMSE---IDENIYKRITRTGHVDRE-AVPNKARVSVRYSGYWEGETAPF-DSSLLRGSKF 131
            |..||:..|   .||.|.  |.:|..:|.: ...:|:..::........|...| |||..|.:.|
 Worm   172 DLFRAVPGEKWTTDEGIV--IEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPF 234

  Fly   132 VFETGQGTVVEGLEVAVRSMRPYEQAEFIISYKLLFGELGCPPRIKPKADALFKV 186
            :|:.....|::|:::|:..|...|:.:.:|.....:|:.|..|.|..||...|.:
 Worm   235 IFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDI 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 23/93 (25%)
TPR repeat 218..257 CDD:276809
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
fkb-5NP_001367683.1 FKBP_C 79..171 CDD:395196
FKBP_C 202..291 CDD:395196 22/88 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160761
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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