DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and Fkbp1a

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001289007.1 Gene:Fkbp1a / 14225 MGIID:95541 Length:150 Species:Mus musculus


Alignment Length:138 Identity:40/138 - (28%)
Similarity:53/138 - (38%) Gaps:24/138 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PWTYSFDELRALMSEIDENIYKRITRT--------------GHVDREAVPNKARVSVRYSGYWEG 116
            |:.|.|     |..|......|..|||              ...|....||::..    .|..| 
Mouse    20 PYFYDF-----LSREAGRRWQKLRTRTFKKLPMEGILKYILARTDSSHGPNRSSC----CGMLE- 74

  Fly   117 ETAPFDSSLLRGSKFVFETGQGTVVEGLEVAVRSMRPYEQAEFIISYKLLFGELGCPPRIKPKAD 181
            :...||||..|...|.|..|:..|:.|.|..|..|...::|:.|||....:|..|.|..|.|.|.
Mouse    75 DGKKFDSSRDRNKPFKFTLGKQEVIRGWEEGVAQMSVGQRAKLIISSDYAYGATGHPGIIPPHAT 139

  Fly   182 ALFKVEVI 189
            .:|.||::
Mouse   140 LVFDVELL 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 31/92 (34%)
TPR repeat 218..257 CDD:276809
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
Fkbp1aNP_001289007.1 FKBP_C 71..147 CDD:306713 28/76 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0545
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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