DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and LOC100534741

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_009289498.1 Gene:LOC100534741 / 100534741 -ID:- Length:752 Species:Danio rerio


Alignment Length:413 Identity:87/413 - (21%)
Similarity:153/413 - (37%) Gaps:92/413 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 IYKRITRTGHVDREAVPNKARVSVRYSGYWEG-ETAPFDSSLLRGSKFVFE--TGQGTVVEGLEV 146
            :.|:|...|.......||..::...:....:. |....|.|  |.:|...|  .|:...:|..||
Zfish    12 VKKKILHGGQGPMPHFPNGTKLVFHFQTLLDNFERTVIDDS--RKNKRPTEIFVGKMFKMEVWEV 74

  Fly   147 AVRSMRPYEQAEF-----------IISYKLLFGELGCPPRIK------------------PKADA 182
            .:.|||..|.|||           |::..:.....|..|...                  |:.|.
Zfish    75 LLTSMRIGEVAEFWCDADHTGLYPIVAKGMRLAAQGKDPLEGQKHMCGMGNVFTYHSTGFPELDE 139

  Fly   183 LFK-----VEVIDYSLIGDAKGI--DAIPQEDRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATA 240
            |.:     :.:::...:||....  ::...|..:|..||    ..||..|...||.||::.||..
Zfish   140 LMRTPQPLIFIMELISVGDPFSYQRESWMMEKDEKLKVV----PSLHYLGNALVKQGRFREAAEK 200

  Fly   241 FERAVSSLNYCR---MANDEEERKQTELLTTLNQNLMIVYNKMNKPKRACIM-----MKALRHLT 297
            ::.||..|...:   |..||:         .:|...:|:...:|..:  |::     .:.:.|.|
Zfish   201 YQEAVVLLRTVQSREMPGDED---------YINLGRLIIPLVLNYCQ--CMLELEEYYEVIEHAT 254

  Fly   298 M---GNPSC-KALFQEGRALAAL-GEYNLARNAYLQAQAKQPANKEISDEIISMNKRI-SKYEEA 356
            .   .:..| ||.::..:|.||: .|....|:..:.|......::.:..|:..:::|: .||.|.
Zfish   255 ELLDKHKDCVKAYYKRAKAYAAVWSEREARRDFQMVANLDITLSRLVHRELNLLSERMKEKYSED 319

  Fly   357 SRDIWARAFSLKNSKSDVRKTPAQLEKEAKEQDFNDKMEDL-IRRFKNTSDQQVSFSRKSYSNAQ 420
            ....|    ::...|.         |||      .|..||: ....|..|:.:.|.|.:...:|:
Zfish   320 KERYW----NILEGKG---------EKE------RDSEEDISAMNTKEESNGEHSLSSEEVKDAE 365

  Fly   421 FDATCKLAKE--HNLKLTLSPIQ 441
            ......:|:|  |:.|...|.::
Zfish   366 QGKDSSVAEENKHDTKSEESAVE 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 25/129 (19%)
TPR repeat 218..257 CDD:276809 13/41 (32%)
TPR repeat 262..295 CDD:276809 4/37 (11%)
TPR repeat 304..329 CDD:276809 7/25 (28%)
LOC100534741XP_009289498.1 FKBP_C 29..>89 CDD:302890 18/61 (30%)
TPR_2 181..207 CDD:285020 11/25 (44%)
TPR repeat 181..206 CDD:276809 10/24 (42%)
TPR repeat 211..259 CDD:276809 9/58 (16%)
TPR repeat 264..290 CDD:276809 7/25 (28%)
TPR repeat 411..437 CDD:276809
TPR repeat 460..490 CDD:276809
TPR_11 465..526 CDD:290150
TPR repeat 495..523 CDD:276809
ASF1_hist_chap <591..741 CDD:304562
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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