DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and fkbp9

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001123385.1 Gene:fkbp9 / 100125793 XenbaseID:XB-GENE-1019523 Length:585 Species:Xenopus tropicalis


Alignment Length:105 Identity:30/105 - (28%)
Similarity:47/105 - (44%) Gaps:9/105 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 HVDREAVPNKAR--------VSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTVVEGLEVAVRS 150
            |:::..||:..:        |...|.|.:...| .||||..|||.:....|:|.::.|::.|:..
 Frog    50 HIEKRWVPDTCQRHVTEGDFVRYHYHGTFPDGT-KFDSSYDRGSTYNVFVGKGQIIAGMDKALLG 113

  Fly   151 MRPYEQAEFIISYKLLFGELGCPPRIKPKADALFKVEVID 190
            |...|:....|...|.:|..|....|.|.|...|.|.::|
 Frog   114 MCVNERRFVKIPPSLAYGSKGLADVIPPDAVLHFDVLLLD 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 28/100 (28%)
TPR repeat 218..257 CDD:276809
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
fkbp9NP_001123385.1 FKBP_C 60..152 CDD:365980 26/92 (28%)
FKBP_C 172..264 CDD:365980
FKBP_C 284..375 CDD:365980
FKBP_C 395..487 CDD:365980
EFh 510..571 CDD:238008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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