DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND2 and ND2

DIOPT Version :9

Sequence 1:YP_003024027.1 Gene:ND2 / 4536 HGNCID:7456 Length:347 Species:Homo sapiens
Sequence 2:YP_009047266.1 Gene:ND2 / 19893529 FlyBaseID:FBgn0013680 Length:341 Species:Drosophila melanogaster


Alignment Length:356 Identity:137/356 - (38%)
Similarity:205/356 - (57%) Gaps:41/356 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     8 VIYSTI-FAGTLITALSSHWFFTWVGLEMNMLAFIPVLTKKMNPRSTEAAIKYFLTQATASMILL 71
            :::.|| ..|||||..|:.|...|:|||:|:|:|||:|:...|..||||::||||||..||.:||
  Fly     8 ILFITIMIIGTLITVTSNSWLGAWMGLEINLLSFIPLLSDNNNLMSTEASLKYFLTQVLASTVLL 72

Human    72 ----MAILFNNMLSGQWTMTNTTNQ-YSSLMIMMAMAMKLGMAPFHFWVPEVTQGTPLTSGLLLL 131
                :.:|.||       |.|..|: ::|::||.|:.:|.|.||||||.|.:.:|....:.|:|:
  Fly    73 FSSILLMLKNN-------MNNEINESFTSMIIMSALLLKSGAAPFHFWFPNMMEGLTWMNALMLM 130

Human   132 TWQKLAPISIMYQISPSLNVSLLLTLS-ILSIMAGSWGGLNQTQLRKILAYSSITHMGWMMAVLP 195
            ||||:||:.::    ..||:..||.:| |||::.|:.||||||.|||::|:|||.|:|||::.|.
  Fly   131 TWQKIAPLMLI----SYLNIKYLLLISVILSVIIGAIGGLNQTSLRKLMAFSSINHLGWMLSSLM 191

Human   196 YNPNMTILNLTIYIILT------TTAFLLLNLNSSTTTLLLSRTWNKLTWLTPLIPSTL----LS 250
            .:.::.::....|..|:      ...|.|.:||...:..:.|:          ::..||    ||
  Fly   192 ISESIWLIYFFFYSFLSFVLTFMFNIFKLFHLNQLFSWFVNSK----------ILKFTLFMNFLS 246

Human   251 LGGLPPLTGFLPKWAIIEEFTKNNSLIIPTIMATITLLNLYFYLRLIYSTSITLLPMSNNVKMKW 315
            ||||||..||||||.:|::.|..|...:.|:|...||:.|:||||:.|| :..:....||..||.
  Fly   247 LGGLPPFLGFLPKWLVIQQLTLCNQYFMLTLMMMSTLITLFFYLRICYS-AFMMNYFENNWIMKM 310

Human   316 QFEHTKPTPF-LPTLIALTTLLLPISPFMLM 345
            .........: :.|..::..|.| ||.|..|
  Fly   311 NMNSINYNMYMIMTFFSIFGLFL-ISLFYFM 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND2YP_003024027.1 ND2 1..346 CDD:177167 137/356 (38%)
ND2YP_009047266.1 ND2 1..340 CDD:214442 133/349 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147871
Domainoid 1 1.000 191 1.000 Domainoid score I3256
eggNOG 1 0.900 - - E1_COG1007
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I3585
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46773
OrthoDB 1 1.010 - - D1153818at2759
OrthoFinder 1 1.000 - - FOG0002463
OrthoInspector 1 1.000 - - oto89890
orthoMCL 1 0.900 - - OOG6_102147
Panther 1 1.100 - - LDO PTHR46552
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2690
SonicParanoid 1 1.000 - - X2194
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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