| Sequence 1: | NP_724538.1 | Gene: | pk / 45343 | FlyBaseID: | FBgn0003090 | Length: | 1299 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_055055.1 | Gene: | LIMD1 / 8994 | HGNCID: | 6612 | Length: | 676 | Species: | Homo sapiens |
| Alignment Length: | 659 | Identity: | 154/659 - (23%) |
|---|---|---|---|
| Similarity: | 224/659 - (33%) | Gaps: | 201/659 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 249 APKPALPPKQKQQRPVPPLPPPPANRVTQDQGT-------------QPAAPQVPLQPLTAGDLQF 300
Fly 301 LNLSLRQ-------------------------RSLPRSMKPFKDAHDISFTFNELDTSAEPEVA- 339
Fly 340 ----TGAAQQESNEPISRTPLTQISYLQKI-PTLPRHFSPSGQGLATPPALGSGGMGLPSSSSAS 399
Fly 400 ALYAAQAAAGILPTS------------------PLPLQRH--QQYLPPHHQQHPGAGMGPGPGSG 444
Fly 445 AAAGPPLGPQYSPGCS---ANPKYSNAQLPPPPHHHHQLSPALSTPSPPSLLHHPAGGTSSASAH 506
Fly 507 APFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSPGEQYRVR 571
Fly 572 QLLHQLPPHDNEVRYCHSLTDEERKELRLFSTQRKRDALGRGNVRQLMSARP-------CDGCDD 629
Fly 630 LISTGDIAVFATRLGPNAS---WHPACFACSVCRELLVDLIYFHRDGRMYCGRHHA----ETLKP 687
Fly 688 RCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRY-IMREGKPYCLHCFDAMFAEYCDY 751
Fly 752 CGEAIGVDQGQ------MSHDGQHWHATDECFSCNTCRCSLL---GRAFLPRRGAIYCSIACSKG 807
Fly 808 EPPTPSDSS 816 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pk | NP_724538.1 | PET_Prickle | 523..618 | CDD:193602 | 16/94 (17%) |
| LIM1_Prickle | 624..682 | CDD:188799 | 15/60 (25%) | ||
| LIM2_Prickle | 687..742 | CDD:188802 | 17/55 (31%) | ||
| LIM3_Prickle | 747..805 | CDD:188804 | 16/66 (24%) | ||
| LIMD1 | NP_055055.1 | Mediates nuclear export | 54..134 | 4/11 (36%) | |
| Atrophin-1 | <69..443 | CDD:331285 | 95/418 (23%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 104..163 | 9/44 (20%) | |||
| Interaction with EGLN1/PHD2 | 186..260 | 12/77 (16%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 189..389 | 53/224 (24%) | |||
| Interaction with RB1. /evidence=ECO:0000269|PubMed:15542589 | 404..442 | 17/104 (16%) | |||
| Necessary for nuclear localization | 472..676 | 52/210 (25%) | |||
| LIM1_Ajuba_like | 472..525 | CDD:188738 | 15/59 (25%) | ||
| LIM2_Ajuba_like | 537..589 | CDD:188741 | 16/52 (31%) | ||
| LIM3_Ajuba_like | 597..658 | CDD:188822 | 16/63 (25%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1704 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.810 | |||||