DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and Fblim1

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:XP_006539276.1 Gene:Fblim1 / 74202 MGIID:1921452 Length:397 Species:Mus musculus


Alignment Length:517 Identity:108/517 - (20%)
Similarity:165/517 - (31%) Gaps:168/517 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 SLRQRSLPRSMKPFKDAHDISFTF--NELDTSAEPEVATGAAQQESNEPISRTPLTQISYLQKIP 366
            |:.|:::..|....:.|..:..|.  ...|.:...||...|.:.....|....|       .|.|
Mouse    16 SVSQKAIMASKPEKRVASSVFITLAPPRRDVAVSEEVGQAACEARRARPWEMLP-------TKTP 73

  Fly   367 -----TLPRHFSPSGQGLAT----PPALGSGGMGLPSSSSASALYAAQAAAGILPTSPLPLQRHQ 422
                 ..|:.::|||:..|:    .|.|.:||..||                     |..|....
Mouse    74 GAAVGRSPKTWTPSGKTNASLSGVTPQLSNGGCSLP---------------------PPSLNEED 117

  Fly   423 QYLPPHHQQHPGAGMGPGPGSGAAAGPPLGPQYSPGCSANPKYSNAQLPPPPHHHHQLSPALSTP 487
            ..|||          .|.|.|.....|...|...||.|.........|||||            |
Mouse   118 LDLPP----------PPPPPSAYLPLPEEEPPVLPGKSLISDLEQLHLPPPP------------P 160

  Fly   488 SPPSLLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQ 552
            .||     |...:..:|.|.                              |||          ..
Mouse   161 PPP-----PQAPSKGSSVHP------------------------------PPG----------HA 180

  Fly   553 IPDDKVPYVNSPGEQYRVRQLLHQLPPHDNEVRYCHSLTDEERKELRLFSTQRKRDALGRGNVRQ 617
            ||.::                  :|||...|     .:|..||:                     
Mouse   181 IPSEE------------------ELPPPPEE-----PVTLPERE--------------------- 201

  Fly   618 LMSARPCDGCDDLISTGDIAVFATRLGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHA 682
             :|...|..|...:|..::||.|.:    ..:|..||.|..||..|....::.:|||..|...:.
Mouse   202 -VSTDVCGFCHKPVSPRELAVEAMK----RQYHAQCFTCRTCRRQLAGQRFYQKDGRPLCEPCYQ 261

  Fly   683 ETLKPRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRYIM-REGKPYCLHCFDAMFA 746
            :||: :|..|.|:: .:....|.|:|:|...|.|..|.:.:..:.:.: .:.:.||:..|...||
Mouse   262 DTLE-KCGKCGEVV-QEHVIRALGKAFHPPCFTCVTCARCISDESFALDSQNQVYCVADFYRKFA 324

  Fly   747 EYCDYCGEAI----GVDQGQMSHDGQHWHATDECFSCNTCRCSL----LGRAFLPRRGAIYC 800
            ..|..|...|    |.|..::...|:::|  :.|:.|..|...|    ..:...|....::|
Mouse   325 PVCSICENPIIPRDGKDAFKIECMGRNFH--ENCYRCEDCSVLLSVEPTDQGCYPLNDHLFC 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 12/94 (13%)
LIM1_Prickle 624..682 CDD:188799 17/57 (30%)
LIM2_Prickle 687..742 CDD:188802 12/55 (22%)
LIM3_Prickle 747..805 CDD:188804 13/62 (21%)
Fblim1XP_006539276.1 LIM <203..260 CDD:351770 18/60 (30%)
LIM2_FBLP-1 267..319 CDD:188758 12/52 (23%)
LIM3_Zyxin_like 327..388 CDD:188743 13/60 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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