Protein Alignment pk and Trip6

DIOPT Version :9

• Sequence 1: NP_724538.1
• Gene: pk / 45343
• FlyBaseID: FBgn0003090
• Length: 1299
• Species: Drosophila melanogaster
• Sequence 2: NP_001121042.1
• Gene: Trip6 / 686323
• RGDID: 1583180
• Length: 480
• Species: Rattus norvegicus
• Alignment Length: 624
• Identity: 144/624 - (23%)
• Similarity: 196/624 - (31%)
• Gaps: 237/624 - (37%)

  Fly   254 LPPKQKQQRPVP--------PLPPPPANRVTQDQGTQPAAPQV---PLQPLTAGDLQFLNLSLRQ 307
            |||||.:...||        .|.||.|:..|    .|| .|:|   ||.|         ....:.
  Rat     7 LPPKQPEPSRVPQGRALPRGTLGPPTAHGAT----LQP-HPRVNFCPLPP---------EQCYQP 57

  Fly   308 RSLPRSMKP-FKDAHDISFTFNELDTSAEPEVATGAAQQESNEPISRTPLTQISYLQKIPTL--- 368
            ..:|....| :..:|                   ||||:....|..|..:...|...:|.:|
  Rat    58 PGVPEDRGPTWVGSH-------------------GAAQRLQGLPPDRGVIHPGSLDAEIDSLTSM 103

  Fly   369 -----------PRHFSPSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPLPLQRHQ 422
                       ||.  |..|....||.....|..|..|..|       ..|.:||.||..
  Rat   104 LADLDGSRSHAPRR--PDRQAFEAPPPHAYRGGSLKPSGGA-------VPAPMLPASPYG----- 154

  Fly   423 QYLPPHHQQHPGAGMGPGPGSGAAAGPPLGPQY-------SP--GCSANPKYSNAQLP---PPPH 475
                           ||.|.|.|.|..|.||.:       .|  ||.. |:...:|..   |.||
  Rat   155 ---------------GPTPASYATASTPAGPAFPVQVKVAQPVRGCGL-PRRGASQASGPLPGPH 203

  Fly   476 ---------------HHHQLSPALSTPSPPSLLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDD 525
                           .|.:..|.:...:  :.:|:|||| .....|.|  .||
  Rat   204 FPLTGRGEVWGAGYRSHREPGPGVKEGA--AGVHNPAGG-GRRGGHEP--QGP------------ 251

  Fly   526 DSGCALEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSPGEQYRVRQLLHQL--PPHDNEVRYCH 588
                                    .||.|::::        :...::|:|.:  ||
  Rat   252 ------------------------LSQPPEEEL--------ERLTKKLVHDMNHPP--------- 275

  Fly   589 SLTDEERKELRLFSTQRKRDALGRGNVRQLMSARPCDGC-DDLISTGDIAVFATRLGPNASWHPA 652
                             ..:..||           |.|| ||::..|...|...|:     :|..
  Rat   276 -----------------SGEYFGR-----------CGGCGDDVVGDGAGVVALDRV-----FHTG 307

  Fly   653 CFACSVCRELLVDLIYFHRDGRMYCGRHHAETLKPRCSACDEIILADECTEAEGRAWHMNHFACH 717
            ||.||.||..|....::..:.|.||...:..||: :||.|.|.|| |....|.|:|:|...|.|.
  Rat   308 CFVCSTCRAQLRGQHFYAVERRAYCESCYVATLE-KCSTCSEPIL-DRILRAMGKAYHPGCFTCV 370

  Fly   718 ECDKQLGGQRY-IMREGKPYCLHCFDAMFAEYCDYCGEAIGVDQGQMS-----------HDGQHW 770
            .|.:.|.|..: :....:.:|:..|...||..|..||.||..:.||..           |.|
  Rat   371 VCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIG--- 432

  Fly   771 HATDECFSCNTCRCSLLG----RAFLPRRGAIYCSIACS 805
                 |:.|..|...|..    :...|..|.|.|. |||
  Rat   433 -----CYKCEECGLLLSSEGECQGCYPLDGHILCK-ACS 465

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pk	NP_724538.1	PET_Prickle	523..618	CDD:193602	9/96 (9%)
		LIM1_Prickle	624..682	CDD:188799	19/58 (33%)
		LIM2_Prickle	687..742	CDD:188802	17/55 (31%)
		LIM3_Prickle	747..805	CDD:188804	18/72 (25%)
Trip6	NP_001121042.1	PHA03247	<3..256	CDD:223021	76/352 (22%)
		LIM1_TRIP6	283..336	CDD:188736	19/57 (33%)
		LIM	343..402	CDD:413332	20/59 (34%)
		LIM3_Zyxin_like	403..465	CDD:188743	18/70 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1704
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810