DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and fhl3a

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:XP_021322623.1 Gene:fhl3a / 567097 ZFINID:ZDB-GENE-030131-4741 Length:279 Species:Danio rerio


Alignment Length:245 Identity:69/245 - (28%)
Similarity:105/245 - (42%) Gaps:37/245 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   576 QLPPHDN-----EVRYCH-----------SLTDEERKELRLFSTQRKRDALGRGNVRQLMSARPC 624
            :|..||:     |.|:.|           ||.||.      |::|  .|||...:......:..|
Zfish    45 ELIGHDSRELFYEDRHYHEHCFRCFRCDRSLADEP------FTSQ--DDALLCNDCYC
NEFSSKC 101

  Fly   625 DGCDDLISTGDIAVFATRL--GPNASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHAETLKP 687
            ..||..:..|      ||.  ...::||..||.|:.|::.:....:.......||...:.....|
Zfish   102 VACDKTVMPG------TRKLEYAGSTWHEGCFICNSCQQPIGSKSFIPDKDDHYCVPCYE
NKFAP 160

  Fly   688 RCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRYIMREGKPYCLHCFDAMFAEYCDYC 752
            ||:.|.:.:.....|..: ..||...|.|..|..||.||.:..|:..|||:.||..::|:.|:.|
Zfish   161 RCTRCKQALAKGGVTYRD-EPWHKECFVCTSCKVQLAGQHFTSRDDSPYCIKCFGNLYAKKCEAC 224

  Fly   753 GEAI-GVDQGQ-MSHDGQHWHATDECFSCNTCRCSLLGRAFLPRRGAIYC 800
            .:.| |...|: :|.:.:.||  ..||:|:.|..||:|..|.|.:..|.|
Zfish   225 NKPITGFGGGKYISFEDRQWH--QPCFTCSRCSVSLVGAGFFPEQDEILC 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 15/57 (26%)
LIM1_Prickle 624..682 CDD:188799 14/59 (24%)
LIM2_Prickle 687..742 CDD:188802 19/54 (35%)
LIM3_Prickle 747..805 CDD:188804 19/56 (34%)
fhl3aXP_021322623.1 LIM <5..33 CDD:295319
LIM1_FHL3 36..94 CDD:188807 15/56 (27%)
LIM2_FHL3 98..155 CDD:188811 14/62 (23%)
LIM3_FHL 162..213 CDD:188732 16/51 (31%)
LIM4_FHL3 221..276 CDD:188818 19/54 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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