DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and zyx

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:XP_005157983.1 Gene:zyx / 564246 ZFINID:ZDB-GENE-070928-18 Length:608 Species:Danio rerio


Alignment Length:621 Identity:136/621 - (21%)
Similarity:204/621 - (32%) Gaps:172/621 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 PEQEAPKPALPPKQKQQRPV----------PP------LPPPPANRVTQDQGT-QPAAPQVPLQP 292
            |..:|..||.||:.:...||          ||      |||||....:..... .|..|..|..|
Zfish    82 PLDDAELPAPPPECQITHPVSDAPPSFPAPPPVAEDLHLPPPPEELTSVPSACFPPPPPPPPPVP 146

  Fly   293 LTAGDLQFLNLSLRQRSLPRSMKPFKDAHDISFTFNELDTSA--EPEV----ATGAAQQESNEPI 351
            .....:....|..:|.|..:.:....|      ..:|::||.  .|::    ::..|.:.:..|.
Zfish   147 ENGAGINSQRLFEKQTSFDKQLGSLTD------MLSEMETSGPFNPKLPSQFSSAPAPKPAPGPP 205

  Fly   352 SRTPLTQISYLQKIPTLPRHFSPSGQG----LATPPALGSGGMGLPSSSSASALYAAQAAAGILP 412
            ...|...:|:|.. |.|..|.||:...    ..|.||      .|.::|..:.:.:......:.|
Zfish   206 PTAPKPALSFLPP-PELQDHPSPAPWAEELRARTRPA------NLSTASVPAPVQSVAKGPAVAP 263

  Fly   413 TSPLPLQRHQQYLPPHHQQHPGAGMGPGPGSGA------AAGPPLG--PQYSPGCSANPKYSNAQ 469
            .:..|..:....|       ....:.|.|..||      ...||..  |...|.....|....|.
Zfish   264 KTNFPPSQLNSNL-------ASKTVSPAPSGGARGFNHTVKSPPQSTFPPPPPAAPPAPIPPPAN 321

  Fly   470 LPPPPHHH--------HQL----SPALSTPSPPSLLHHPAGG------TSSASAHAPFLGGPHMD 516
            :|.|..:|        ||.    |||....||.|..:.|||.      :.|.:...|  ||..:.
Zfish   322 IPKPAFNHSETSPIGSHQSFAPPSPAAPKTSPVSTFNRPAGNNVPSKVSGSGTGSGP--GGAPLT 384

  Fly   517 MQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSPGEQYRVRQLLHQLPPHD 581
            |:.           :||.         :::...|.|..|...|.:.||..:.             
Zfish   385 MRE-----------VEEL---------EKMTKDFIQHMDKHPPVITSPATEV------------- 416

  Fly   582 NEVRYCHSLTDEERKELRLFSTQRKRDALGRGNVRQLMSARPCDGCDDLISTGDIAVFATRLGPN 646
                                                      |..|.:.:|....||.|.    :
Zfish   417 ------------------------------------------CGKCGETLSRSQPAVRAM----D 435

  Fly   647 ASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHAETLKPRCSACDEIILADECTEAEGRAWHM 711
            ..:|..||.|..|:..|..:.::.|||...|...:..:|.. ||.|.|.| .|...:|.|:.:|.
Zfish   436 KLFHSHCFCCVSCQRPLQGMQFYDRDGTPQCEECYMSSLSV-CSRCGERI-TDRVLKAMGQCFHA 498

  Fly   712 NHFACHECDKQLGGQRYIM-REGKPYCLHCFDAMFAEYCDYCGEAIGVDQGQMSHD-------GQ 768
            :.|.|..|:..|.|..:|. .:.||||:..:...|:..|..|.|.|..|.|  |.:       .:
Zfish   499 HCFLCTTCNCSLEGAPFITDDDNKPYCVKDYHRRFSPLCVSCNEPIIPDPG--SEETVRVVALEK 561

  Fly   769 HWHATDECFSCNTCRCSLLGRA----FLPRRGAIYC 800
            ::|.  :|:.|..|...|...|    ..|..|.|.|
Zfish   562 NFHL--KCYRCEDCARPLSIEADADGCYPLNGKILC 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 8/94 (9%)
LIM1_Prickle 624..682 CDD:188799 16/57 (28%)
LIM2_Prickle 687..742 CDD:188802 19/55 (35%)
LIM3_Prickle 747..805 CDD:188804 17/65 (26%)
zyxXP_005157983.1 LIM 383..470 CDD:295319 25/165 (15%)
LIM 477..535 CDD:295319 20/58 (34%)
LIM3_Zyxin 537..603 CDD:188819 17/63 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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