DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and fhl2b

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:NP_001006028.2 Gene:fhl2b / 450007 ZFINID:ZDB-GENE-041010-121 Length:279 Species:Danio rerio


Alignment Length:274 Identity:78/274 - (28%)
Similarity:116/274 - (42%) Gaps:46/274 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 LYFSQIPDDKVPY-VNSPGEQYRVRQLLHQLPPHDN--EVRYCH-SLTDEERKELRLFSTQRKRD 608
            ||.:...:.|.|. .||....|:.|..      ||:  ....|| ||.|:.      |||:.:  
Zfish    35 LYSNTCEECKKPIGCNSRDLSYKDRHW------HDDCFHCFKCHRSLVDKP------FSTKDE-- 85

  Fly   609 ALGRGNVRQLMS--------ARPCDGCDDLISTGDIAVFATRLGPNA-SWHPACFACSVCRELLV 664
                    ||:.        :..|..|...|..|     :.::.... |||..||.|..|::.:.
Zfish    86 --------QLLCTECYSNEYSSKCFECKKTIMPG-----SRKMEHKGNSWHETCFTCQRCQQPIG 137

  Fly   665 DLIYFHRDGRMYCGRHHAETLKPRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRYI 729
            ...:..:|...||...:.:....:|..|.:.|.....|..: :.||.:.|.|..|.:||.|||:.
Zfish   138 TKSFIPKDNSNYCVPCYEKQFALQCVQCKKPITTGGVTYHD-QPWHKDCFLCTGCKQQLSGQRFT 201

  Fly   730 MREGKPYCLHCFDAMFAEYCDYCGEAIGVDQGQ--MSHDGQHWHATDECFSCNTCRCSLLGRAFL 792
            .|:..||||:||..::|:.|..|...|....|.  :|.:.:.||  ::||:|..|..||:||.||
Zfish   202 SRDDFPYCLNCFCNLYAKKCAACTTPISGLGGSKYISFEERQWH--NDCFNCKKCSVSLVGRGFL 264

  Fly   793 PRRGAIYCSIACSK 806
            ..|..|.|. .|.|
Zfish   265 TERDDILCP-ECGK 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 18/73 (25%)
LIM1_Prickle 624..682 CDD:188799 14/58 (24%)
LIM2_Prickle 687..742 CDD:188802 20/54 (37%)
LIM3_Prickle 747..805 CDD:188804 20/59 (34%)
fhl2bNP_001006028.2 LIM <7..33 CDD:295319
LIM 36..97 CDD:295319 19/82 (23%)
LIM 101..157 CDD:295319 14/60 (23%)
LIM3_Fhl2 162..218 CDD:188815 21/56 (38%)
LIM4_FHL2 221..278 CDD:188817 22/60 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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