DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pk and LMO7

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:XP_024305122.1 Gene:LMO7 / 4008 HGNCID:6646 Length:1727 Species:Homo sapiens


Alignment Length:1229 Identity:210/1229 - (17%)
Similarity:362/1229 - (29%) Gaps:487/1229 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QKYYRQLYSKAAAQRLADANQEP-DNARDREYDTVDCDLIAGQLDAVEDADDGIDLGDHSSTPKG 130
            ::.::::|.:..::.::|.:.|. .|.|...|:  :...|..||.. :|.....||.......|.
Human   677 ERLFQKIYGENGSKSMSDVSAEDVQNLRQLRYE--EMQKIKSQLKE-QDQKWQDDLAKWKDRRKS 738

  Fly   131 GATTAGRPLFPHSSSPRRSKKLLRSLRAHVRGEKLPKNDTTTANESSEVTQRNARVTVLDDPFLF 195
                       ::|..::.|:....:..... ||..::..|......:...:|.:.||.....::
Human   739 -----------YTSDLQKKKEEREEIEKQAL-EKSKRSSKTFKEMLQDRESQNQKSTVPSRRRMY 791

  Fly   196 GIDADHLGDLVVRGKRYSTLDATENMARFYAEQEATAQVLEIIEQEEESPEQEAPKPALPPKQKQ 260
            ..|     |::..|||..|:..:|  |.:.:|:         :|::..:...|.||.......|:
Human   792 SFD-----DVLEEGKRPPTMTVSE--ASYQSER---------VEEKGATYPSEIPKEDSTTFAKR 840

  Fly   261 QRPVPPLPPPPANRVTQDQGTQPAAP-QVPLQPLTAGDLQFLNLSLRQR-----------SLPRS 313
            :           :|||    |:...| |.|::..:...|.    |||.|           |||||
Human   841 E-----------DRVT----TEIQLPSQSPVEEQSPASLS----SLRSRSTQMESTRVSASLPRS 886

  Fly   314 M--------------KPF-----------------------KDAHDISFTFNELDTSAEP----- 336
            .              :||                       .|..||..|.|.:.::..|     
Human   887 YRKTDTVRLTSVVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNNVVSTPAPSPDAS 951

  Fly   337 EVATGAAQQE----SNEPISRTPLTQISYLQKIPTLPRHFSPSGQGLATPPALGS-GGMGLPSSS 396
            ::|:..:.|:    :.|.::|.|         .||.|.......|...:...|.| .|:.|.|.|
Human   952 QLASSLSSQKEVAATEEDVTRLP---------SPTSPFSSLSQDQAATSKATLSSTSGLDLMSES 1007

  Fly   397 SASALYAAQAAAGILPTSP-LPLQRHQQYLPPHH---QQHPGAGMGPG-------PG---SGAAA 447
            ....:            || ..:.|.|.......   .|.||..:..|       ||   :...|
Human  1008 GEGEI------------SPQREVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASVEA 1060

  Fly   448 GPPL---------------GPQYSPGCSANPKYSNAQLPPPPH------HHHQLSPALSTPSPPS 491
            |.|.               ..::|...|...:.:.|:.....|      .:.:.......||.|.
Human  1061 GSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGKADWGKDQPSLPF 1125

  Fly   492 LLHHPAGGTS----------------------------------------SASAHAPFLGGPH-- 514
            :.|.....||                                        |::..:..:.|.|  
Human  1126 IRHKTLNLTSMATKIIGSPETKWIDATSGIYNSEKSSNLSVTTDFSESLQSSNIESKEINGIHDE 1190

  Fly   515 --------------MDMQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSPG 565
                          .:::|:|...:.........:||......|.|      :||..||.:::|.
Human  1191 SNAFESKASESISLKNLKRRSQFFEQGSSGFSYSSWVYLCGSSDSV------VPDLPVPTISAPS 1249

  Fly   566 ------EQYRVRQLLHQLPPHDNEVRYCHSLTDEERKELRLFSTQRKRDALGRGNVRQLMSARPC 624
                  |:.|.||...|    ..:.|........|:::|| ...||.:....|.|.:.|      
Human  1250 RWVWDQEEERKRQERWQ----KEQDRLLQEKYQREQEKLR-EEWQRAKQEAERENSKYL------ 1303

  Fly   625 DGCDD---LISTGDIAVFATRLGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHAETLK 686
               |:   ::|:..::: .||....|:|                                     
Human  1304 ---DEELMVLSSNSMSL-TTREPSLATW------------------------------------- 1327

  Fly   687 PRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRYIMREGKPYCLHCFDAMFAEYCDY 751
                         |.|.:||               .....|...|.|:           .|....
Human  1328 -------------EATWSEG---------------SKSSDREGTRAGE-----------EERRQP 1353

  Fly   752 CGEAIGVDQGQMSHDGQHWHATDECFSCNTCRCSLLGRAFLPRRGAIYCSIACSKGEPPTPSDSS 816
            ..|.:..|||:...|                      :..:.|.         .|.|.....:..
Human  1354 QEEVVHEDQGKKPQD----------------------QLVIERE---------RKWEQQLQEEQE 1387

  Fly   817 GTGMYTTPTPPTQRVRPHPQAPLPARIPSSHASSSPPMSPQQQQQHQATFNQ----AMYQMQ--- 874
                       .:|::               |.:.....|.::|:.||...:    .:||.:   
Human  1388 -----------QKRLQ---------------AEAEEQKRPAEEQKRQAEIERETSVRIYQYRRPV 1426

  Fly   875 -----SQQMEAAGGLV--DQSKSYAASDSD------AGVVKDLEHGGHM-------------GGG 913
                 .:..||:.|.:  |::||.:.::.|      .|..|.|:..|:|             .|.
Human  1427 DSYDIPKTEEASSGFLPGDRNKSRSTTELDDYSTNKNGNNKYLDQIGNMTSSQRRSKKEQVPSGA 1491

  Fly   914 DL----------------TDFSGGRASSTSQNLSPLNSPGDFQPHFLPKPMELQRDGVYNFNEMS 962
            :|                .|.|..|..|.|.|..|::.||            :.|.|     |..
Human  1492 ELERQQILQEMRKRTPLHNDNSWIRQRSASVNKEPVSLPG------------IMRRG-----ESL 1539

  Fly   963 SNLDA---------AWSAKPTNSYHLQRQLLENPHTASMPELAGKLVAPPAHMQHLSQLHAVSSH 1018
            .|||:         .|..:||..|          .::|:.:.:    .||      .||.:.|:.
Human  1540 DNLDSPRSNSWRQPPWLNQPTGFY----------ASSSVQDFS----RPP------PQLVSTSNR 1584

  Fly  1019 QFQQHEYADILHPPPPPPGEIPELPTPNLSVASTALPPELMGSPTHS-AGDRSLNTPMS 1076
            .:.::..:.:   |||..|.:   .|....||:|..|.....||:.| :|.:..|..:|
Human  1585 AYMRNPSSSV---PPPSAGSV---KTSTTGVATTQSPTPRSHSPSASQSGSQLRNRSVS 1637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 22/100 (22%)
LIM1_Prickle 624..682 CDD:188799 6/60 (10%)
LIM2_Prickle 687..742 CDD:188802 7/54 (13%)
LIM3_Prickle 747..805 CDD:188804 7/57 (12%)
LMO7XP_024305122.1 DUF4757 213..>263 CDD:318215
DUF4757 627..774 CDD:318215 18/111 (16%)
PDZ 1042..1109 CDD:238080 10/66 (15%)
GBP_C <1255..1311 CDD:328214 15/69 (22%)
Neuromodulin_N <1256..1414 CDD:331332 42/305 (14%)
coiled coil 1298..1309 CDD:293879 3/19 (16%)
LIM 1642..1700 CDD:259829
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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