DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and Prickle4

DIOPT Version :10

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:NP_001277266.1 Gene:Prickle4 / 381104 MGIID:2685785 Length:369 Species:Mus musculus


Alignment Length:904 Identity:173/904 - (19%)
Similarity:293/904 - (32%) Gaps:318/904 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KIRVAVRVRPFNERELEGNPRNIIKVLDKST--------LMFDPDEDEDEFFFHGVKLTHRDITK 63
            :::...|:...|..:|.|..:..:..|.:||        |:|..:|     .||..::.......
Mouse   504 RLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEE-----AFHPREMNAEPSQM 563

  Fly    64 RVKKKLTMEYDDVFDNTATNNDI--FEVCMKPLVQSVMNGYNCSVFVYGATGAGKTHTMLGNETC 126
            :..|:...|.:|:........:.  |||   ||..|            |:.|.|.  ::.||.  
Mouse   564 QSPKETKAEDEDIVLTPDGTREFLTFEV---PLNDS------------GSAGLGV--SVKGNR-- 609

  Fly   127 PGITFLTVKELFRQIESLSEVRKFDIGISYLEVYNELVMNLLTKSGPLKLREDSHGVVVSGLVLK 191
                              |:....|:||....:.|.   ...:|.|.|::.:....|....|:.|
Mouse   610 ------------------SKENHADLGIFVKSIING---GAASKDGRLRVNDQLIAVNGESLLGK 653

  Fly   192 QIHNATELLELLALGNRNRTQHPTDANAESSRSHAIFQVHIRMVE-KKTGQKRAVKLSM-IDLAG 254
            ....|.|.|         |....|:.|........:.:...|..| :..|...|.:|.: .:|..
Mouse   654 ANQEAMETL---------RRSMSTEGNKRGMIQLIVARRISRCNELRSPGSPAAPELPIETELDD 709

  Fly   255 SERAASTKGVGIRFKEGANINKSLLALGNCINKLADGLKHIPYRDSNLTRILKDSLGGNCQ---- 315
            .||               .|:.||.: |      .:||...|.|::.|:||:     |.||    
Mouse   710 RER---------------RISHSLYS-G------IEGLDESPTRNAALSRIM-----GKCQLSPT 747

  Fly   316 -------TVMIAN-----ISP------SSLTYDDTYNTLKYASRAKK--IRTTVRQNIVPSNVPK 360
                   ||||.:     :.|      ||.::||....:..|....|  |..:...::.|...| 
Mouse   748 VNMPHDDTVMIEDDRLPVLPPHLSDQSSSSSHDDVGFIMTEAGTWAKATISDSADCSLSPDVDP- 811

  Fly   361 EFLVKKVNEQAEELERLRAKVADLEEQLRKKEQEAAAAA---PGPSLALNAT----LLSTWVSRI 418
                    ..|.:.|....::|| |.:|...:.:.|.:.   .||||.|..:    .|.|.|:.:
Mouse   812 --------VLAFQREGFGRQIAD-ETKLNTVDDQRAGSPNRDVGPSLGLKKSSSLESLQTAVAEV 867

  Fly   419 D------------------SCYASMRQALQHLIALKSKEKLL------NMRVKLKEQAETIAR-- 457
            .                  .|..|.|.|:.     ||.:|.:      .|.. |:|..|..:|  
Mouse   868 TLNGNIPFHRPRPRIIRGRGCNESFRAAID-----KSYDKPMVDDDDEGMET-LEEDTEESSRSG 926

  Fly   458 ---IVT------------LDGSHLNEDIAKMEASVDRCGKQVANQQADKTRWQERFRQSLRSRNA 507
               :.|            ::|.....|  |.|...|:.||       ||.:.:|:.:..|:::  
Mouse   927 RESVSTSSDQPSYSLERQMNGDPEKRD--KAEKKKDKAGK-------DKKKDREKEKDKLKAK-- 980

  Fly   508 LRKEIAQSELATVLKGILTG-----------KDAEIEALQATLYKEHVLQMSFTYAQENKLWHNI 561
                          ||:|.|           ||.::|.:...     .:|.||| ::|::     
Mouse   981 --------------KGMLKGLGDMFRFGKHRKDDKMEKMGRI-----KIQDSFT-SEEDR----- 1020

  Fly   562 MVLSGDIIQQNYLLLRSMDRLDNVTYDKLKRLVKLNQRQRGVTFFDDDGQQQDRNDIDLSSNSLD 626
                                            |::.:.|..:.....:.:::...:.|.:  .:.
Mouse  1021 --------------------------------VRMKEEQERIQAKTREFRERQARERDYA--EIQ 1051

  Fly   627 DIANLSDCSED-------------AVDFPPDGEDEDGSTMRSVVGGAAGGAMKRSKLNDGSESEP 678
            |......|.::             |::..|....| |..|.::.  |.....:.||..|.:.|.|
Mouse  1052 DFHRTFGCDDELLYGGMSSYDGCLALNARPQSPRE-GHLMDTLY--AQVKKPRSSKPGDSNRSTP 1113

  Fly   679 ETCSLQGDSANEDTATE-RNIFKKPKMVS------RTMSFKTTSLAGGGILSRPPISRRTPTKQA 736
                     :|.|.... |..|::.|...      ||.||:.:..:     |||          |
Mouse  1114 ---------SNHDRIQRLRQEFQQAKQDEDVEDRRRTYSFEQSWSS-----SRP----------A 1154

  Fly   737 KVTGKTTATTTTATVSHRLKVPRLVVSQAMMDSLSKKKVPQSPSGDIADKNKLNVSDDS 795
            ..:|:       .:||..::|.|  ..|...:|..:.:...|.....:.||..:||.||
Mouse  1155 SQSGR-------HSVSVEVQVQR--QRQEERESFQQAQRQYSSLPRQSRKNASSVSQDS 1204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 13/105 (12%)
LIM1_Prickle 624..682 CDD:188799 13/70 (19%)
LIM2_Prickle 687..742 CDD:188802 14/61 (23%)
LIM3_Prickle 747..805 CDD:188804 13/49 (27%)
Prickle4NP_001277266.1 PET_OEBT 1..116 CDD:193603
LIM1_Testin_like 124..181 CDD:188726
LIM2_Testin_like 187..241 CDD:188727
Blue background indicates that the domain is not in the aligned region.

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