DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pk and Tes

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster


Alignment Length:667 Identity:185/667 - (27%)
Similarity:257/667 - (38%) Gaps:180/667 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 PALPPKQKQQRPVPPLPPPP----------ANRVTQDQGTQPAAPQVPL-----QPLTAGDLQF- 300
            |||.|.|:.|:....|...|          ||.........||:....|     :||.....|| 
  Fly   210 PALMPTQEAQQTWQSLGLMPVADDTLNELLANPKVAQALASPASAHPKLLVAFSEPLCESTAQFE 274

  Fly   301 LNLSLRQRSLPRSMKPFKDA------HDISF-------TFNELDTSAEPEVATGA--AQQESNEP 350
            .|.:||.::..:.:...|.|      |.|.:       ...:|:.|.:|::...|  .::..|.|
  Fly   275 ENGALRAQTREKLLGISKPALLSLVTHGIVYDKVLGILQEKKLNISRDPKLGPIAEFRKEYVNNP 339

  Fly   351 ISRTPLTQISYLQKIPTLPRHFSPSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSP 415
            ..|..:..|  ..:.|..|         :.:||       |.|.:                  ||
  Fly   340 QFRAEINTI--CPQPPMTP---------IKSPP-------GTPFN------------------SP 368

  Fly   416 LPLQRHQQYLPPHHQQHPGAGMGPG-PGSGAAAGPPLGPQYSPGCSANPKYSN----AQL--PPP 473
            |||:...|.       ..||.|... |......|......|..|..||..|..    ||:  ..|
  Fly   369 LPLKNPVQI-------RMGAQMRQDTPMRRVKFGGVSTIVYDCGLPANTDYDRDPVFAQILQAEP 426

  Fly   474 PHHHHQLSPALSTPSPPSLLHHPAGGTS--------------------------SASAHAPFL-- 510
            ..|..|.:.|...||...:.:.||...|                          ||.::||:.  
  Fly   427 LKHAFQEARAGRAPSSVVISNIPAPVASLAELRGLNPATRAQLQSVGLDKNMLQSAVSNAPYYDR 491

  Fly   511 --------GGPH-----MDMQRQSHS---DDD--------------SGCALEEYTWVPPGLRPDQ 545
                    |..|     :...:|.|.   |||              :||....|.      :|..
  Fly   492 LFRSLHDKGISHDQCHLLQPMKQVHDWLLDDDQLLDEIDKVFADMANGCKDISYP------KPSL 550

  Fly   546 VRLYFSQIPD----DKVPYVNSPGEQYRVRQL------LHQLPPHDNEVRY--CHSLTDEERKEL 598
            ..|..||..|    .|.|   :||  |....|      ...:|..::...|  |..: .|:.::|
  Fly   551 GELPTSQSSDSGFHSKPP---TPG--YGSEDLTAGQGRFASIPGIEDMNMYPSCAGM-PEQFQQL 609

  Fly   599 RLFSTQRKRDALGRGNVRQLMSARPCDGCDDLISTGDIAVFATRLGPNASWHPACFACSVCRELL 663
            ||...    :|.|:.:.|.::    |..|:..|:.|::||.|.|.|...:|||.||.|..|||||
  Fly   610 RLHGD----EASGKNSTRTIL----CADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELL 666

  Fly   664 VDLIYFHRDGRMYCGRHHAETLK-PRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQR 727
            .||:||...|:::|||..|..|| |||.||||:|...|.|.||...:|:.||.|::||:.|.||:
  Fly   667 ADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQ 731

  Fly   728 YIMRE--GKPYCLHCFDAMFAEYCDYCGEAIG-VDQGQMSHDGQHWHATDECFSCNTCRCS--LL 787
            ||..|  ..|.||.|:|.:||..|..|..||| .||| ::....||||:  ||.|...:||  |:
  Fly   732 YIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPADQG-VAWGDVHWHAS--CFVCAGVQCSKPLI 793

  Fly   788 GRAFLPRRGAIYCSIAC 804
            |..|..:....:||..|
  Fly   794 GGRFCVKENMPFCSPTC 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 27/123 (22%)
LIM1_Prickle 624..682 CDD:188799 28/57 (49%)
LIM2_Prickle 687..742 CDD:188802 28/56 (50%)
LIM3_Prickle 747..805 CDD:188804 23/61 (38%)
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 28/56 (50%)
LIM2_Testin_like 691..748 CDD:188727 28/56 (50%)
LIM 755..810 CDD:295319 22/57 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D34289at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24211
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
54.920

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