DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and scel

DIOPT Version :10

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:XP_005168027.2 Gene:scel / 368684 ZFINID:ZDB-GENE-030616-15 Length:612 Species:Danio rerio


Alignment Length:657 Identity:103/657 - (15%)
Similarity:207/657 - (31%) Gaps:190/657 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 KNDTTTANESSEVTQRNARVTVLDDPFLFGIDADHLGDL-----------VVRGKRYSTLDATEN 220
            |..|.||:..|.|...:.|         ||...|.|.:.           :.|....||....:|
Zfish    82 KTTTVTASPGSSVQALSKR---------FGGSQDKLNETRTPLNKPSVKSLPRTSTTSTTTTVKN 137

  Fly   221 MARFYAEQEATAQVLEIIEQE-------EESPEQEAPKPALPPKQKQQRPVPPLPPPPANRVTQD 278
            ..: ..|...|....::::..       :.:|...:.:.....|..:|..:    ...:::.|.|
Zfish   138 GTK-TTETTVTTTKQDVVKSSTKLETVIDRNPADSSTRRTGDYKTTRQEDI----TVKSSKDTVD 197

  Fly   279 QGTQPAAPQVPLQPLTAGDLQFLNLSLRQRSLPRSMKPFKDAHDISFTFNELDTSAEPEVA---T 340
            ..:.|......::..|..|:      |..::.|.|::..|.:.:::.|.:.:.|:.:||::   |
Zfish   198 GPSSPVKTTTSIKSYTKEDV------LPAKTTPYSVQSTKSSENLTPTSSIMTTNTKPEISDSKT 256

  Fly   341 GAAQQESNEPISRTPLTQI-------SYLQ--------KIPTLPRHFSPSGQGL----ATPPALG 386
            .....:|::.:..||.:.:       :|.:        |.||.|...:.|.:..    .:|..|.
Zfish   257 EVVTVKSSKTVIDTPASPVKTTTSIKTYTKEDVTSTNTKRPTSPVKTTTSIKTFTKEDVSPAKLT 321

  Fly   387 SGGMGLPSSSSASALYAAQAAAGI--LPTSPLPLQRHQQYLPPHHQQHPGAGMGPGPGSGAAAGP 449
            :.......|...:.:...:::..|  :|.||:   :....:..:.::.             ...|
Zfish   322 TTTTYTTKSDYKTEVATVKSSKDIIDIPASPV---KTTTSIKTYTKED-------------VTSP 370

  Fly   450 PLGPQYSPGCSANPKYSNAQLPPPPHHHHQLSPALSTPSPPSLLHHPAGGTSSASAHAPFLGGPH 514
            ...| ||...:.:.|......|.........:..::..|...::..|.....:.::::       
Zfish   371 KTTP-YSVRSTKSSKDFLYDTPTKTSISDYKTEVVTVNSSKDIVDIPTSPVKTTTSYS------- 427

  Fly   515 MDMQRQSHSDDDSGCALEEYTWVPPGLRPDQVR--------LYFSQIPDDKVPYVNSPGEQYRVR 571
                .:|::.:|..         |.....|.:|        ||.:.||                 
Zfish   428 ----IKSYTKEDVS---------PTKTTSDSIRSTKSSEDLLYDTLIP----------------- 462

  Fly   572 QLLHQLPPHDNEVRYCHSLTDEERKELRLFSTQRKRDALGRGNVRQLMSARPCDGCDDLISTGDI 636
                      ..::..:|..|..|::|....|.|                       .:.||.|.
Zfish   463 ----------LSIKSTNSKPDSSREDLSSSKTVR-----------------------TVYSTIDR 494

  Fly   637 AVFATRLGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHAETLKPRCSACDEIILADE- 700
            ..::|.|.|  |:....:..|...|.:.|.:.......:|.........|..|:.|::.:..|| 
Zfish   495 NEWSTDLSP--SYTRTSYTESRPFEYMSDSLTSKTTTTVYSSPERKVNAKDICTYCNQSMYTDEK 557

  Fly   701 ---------CTEAEGRAWHMNHFACHECDKQLGGQRYIMREGKPYCLHCFDAMFAEYCD-YCGEA 755
                     |        |...|.|..|:..||.    :|.|        |:::...|. :|...
Zfish   558 FILDDMNINC--------HARCFKCGVCNTSLGN----LRAG--------DSLWVYQCAIHCASC 602

  Fly   756 IGVDQGQ 762
            .||.:.:
Zfish   603 FGVTKNK 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 14/102 (14%)
LIM1_Prickle 624..682 CDD:188799 11/57 (19%)
LIM2_Prickle 687..742 CDD:188802 13/64 (20%)
LIM3_Prickle 747..805 CDD:188804 4/17 (24%)
scelXP_005168027.2 None

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