DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and CG34325

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:NP_001097003.1 Gene:CG34325 / 32656 FlyBaseID:FBgn0085354 Length:179 Species:Drosophila melanogaster


Alignment Length:190 Identity:57/190 - (30%)
Similarity:81/190 - (42%) Gaps:15/190 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   619 MSARP--CDGCDDLISTGDIAVFATRLGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHH 681
            ||.:|  |..|:::|....|    |.||  .:|||..|.|..|:..:.:..:...||:..|....
  Fly     1 MSEQPSICHKCNEVIQLRII----TALG--KTWHPEHFVCKDCQCPITEASFNINDGQPVCSACF 59

  Fly   682 AETLKPRCSACDEIILADECTEAEGRAWHMNHFACH-ECDKQLGGQRYIMREGKPYCLHCFDAMF 745
            .......|..|...|| :...:|.|..||...|.|. .|.:||.|..:...:|.|||...|:.||
  Fly    60 VSNYSGICHGCKRPIL-ERTIKAMGETWHEECFLCRGPCMQQLAGSSFYEHDGLPYCRTDFEHMF 123

  Fly   746 AEYCDYCGEAIGVDQGQMSHDGQHWHATDECFSCNTCRCSLLGRAFLPRRGAIYCSIACS 805
            |..|..|...| .:...::.|.: ||.  |||.|..|:..:...:|:.......|. |||
  Fly   124 AARCGNCKAPI-TENAIVALDAK-WHR--ECFKCKKCKTPITASSFVVEDNQPLCK-ACS 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602
LIM1_Prickle 624..682 CDD:188799 16/57 (28%)
LIM2_Prickle 687..742 CDD:188802 18/55 (33%)
LIM3_Prickle 747..805 CDD:188804 14/57 (25%)
CG34325NP_001097003.1 LIM 8..59 CDD:295319 16/56 (29%)
LIM 67..119 CDD:295319 18/52 (35%)
LIM 127..175 CDD:295319 12/51 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593918at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
32.920

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