DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and FHL3

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:NP_004459.2 Gene:FHL3 / 2275 HGNCID:3704 Length:280 Species:Homo sapiens


Alignment Length:263 Identity:74/263 - (28%)
Similarity:105/263 - (39%) Gaps:56/263 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   576 QLPPHDN-----EVRYCH-----------SLTDE----ERKEL-------RLFSTQRKRDALGRG 613
            ||..||:     |.|:.|           ||.||    :..||       ..||:|         
Human    45 QLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQ--------- 100

  Fly   614 NVRQLMSARPCDGCDDLISTGDIAVFATRLGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCG 678
                      |..|.:.:..|...:   ..| ..:||..||.||.|.:.|....:....|..||.
Human   101 ----------CSACGETVMPGSRKL---EYG-GQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCV 151

  Fly   679 RHHAETLKPRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRYIMREGKPYCLHCFDA 743
            ..:.....|||:.|.:.:.....|..: :.||.....|..|...|.||::..|:..|||:.||..
Human   152 PCYENKFAPRCARCSKTLTQGGVTYRD-QPWHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGE 215

  Fly   744 MFAEYCDYCGEAI-GVDQGQ-MSHDGQHWHATDECFSCNTCRCSLLGRAFLPRRGAIYCSIACSK 806
            :||..|..|...| |:..|: :|.:.:|||  ..||||..|..||:|:.|:|....:.|. .||:
Human   216 LFAPKCSSCKRPIVGLGGGKYVSFEDRHWH--HNCFSCARCSTSLVGQGFVPDGDQVLCQ-GCSQ 277

  Fly   807 GEP 809
            ..|
Human   278 AGP 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 16/68 (24%)
LIM1_Prickle 624..682 CDD:188799 15/57 (26%)
LIM2_Prickle 687..742 CDD:188802 17/54 (31%)
LIM3_Prickle 747..805 CDD:188804 20/59 (34%)
FHL3NP_004459.2 LIM <5..33 CDD:295319
LIM1_FHL3 36..94 CDD:188807 13/48 (27%)
LIM2_FHL3 98..155 CDD:188811 17/79 (22%)
LIM3_FHL 162..213 CDD:188732 14/51 (27%)
LIM4_FHL3 221..276 CDD:188818 20/57 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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