DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and Tgfb1i1

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:XP_036008777.1 Gene:Tgfb1i1 / 21804 MGIID:102784 Length:496 Species:Mus musculus


Alignment Length:648 Identity:141/648 - (21%)
Similarity:180/648 - (27%) Gaps:285/648 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 PVPPL--PPPP--ANRVTQD-QGTQPAAPQVPLQPLTAGDLQFLNLSLRQRSLPRSMKPFKDAHD 322
            |..|.  ||||  :.||... .|..||:     ..||:               |.|.......|.
Mouse     3 PCSPFIAPPPPTVSQRVPASIHGHGPAS-----NSLTS---------------PPSPSSAPTGHG 47

  Fly   323 ISFTFNELDTSAEP-EVATGAAQQESN------------EPISRTPLTQISYLQKIPTLPRHFSP 374
            ...|..:|..||.| ...||:.:....            :|.|..|:.        |..|...|.
Mouse    48 PRPTLPKLSASAPPWRTWTGSGESSGTTGDKDHLYSTVCKPRSPKPVA--------PVAPPFSSS 104

  Fly   375 SGQGLATPPALGSGGMGL----------------------PSS---------------SSASALY 402
            ||       .||:|...|                      |||               ||.:.|.
Mouse   105 SG-------VLGNGLCELDRLLQELNATQFNITDEIMSQFPSSKMAEGEEKEDQSEDKSSPTVLA 162

  Fly   403 AAQAAAGIL--PTSPLPLQ----------------------RHQQYLPPHHQQHPGAGMGPGPGS 443
            .::...|:|  |.||.|..                      |.|.:||                 
Mouse   163 GSEVIHGVLHSPPSPFPAPSKPSATSATQELDRLMASLSDFRVQNHLP----------------- 210

  Fly   444 GAAAGPPLGPQYSP---GCSANPKYSNAQLPPPPHHHHQLSPALSTPSPPSLLHHPAGGTSSASA 505
              |:|||..|..||   ||                           ||||       |.||..|.
Mouse   211 --ASGPPQPPAASPTREGC---------------------------PSPP-------GQTSKGSL 239

  Fly   506 HAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSPGEQYRV 570
            .. .||....|:.|:.                                    ||           
Mouse   240 DT-MLGLLQSDLSRRG------------------------------------VP----------- 256

  Fly   571 RQLLHQLPPHDNEVRYCHSLTDEERKELRLFSTQRKRDALGRGNVRQLMSARPCDGCDDLISTGD 635
                                            ||.|               ..|..|:..|: |.
Mouse   257 --------------------------------TQAK---------------GLCGSCNKPIA-GQ 273

  Fly   636 IAVFATRLGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHAETLKPRCSACDEIILADE 700
            :   .|.||  .:|||..|.||.|...|....:|.:||..:|...:.|...|||..|::.| ..:
Mouse   274 V---VTALG--RAWHPEHFLCSGCSTTLGGSSFFEKDGAPFCPECYFERFSPRCGFCNQPI-RHK 332

  Fly   701 CTEAEGRAWHMNHFACHECDKQLGGQRYIMREGKPYCLHCFDAMFAEYCDYCGEAIGVDQGQMSH 765
            ...|.|..||..||.|..|.:..|.:.:..|||:|||...|..:||..|..|...| :| ..:|.
Mouse   333 MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQLFAPRCQGCQGPI-LD-NYISA 395

  Fly   766 DGQHWHATDECFSCNTCRCSLLGRAFLPRRGAIYC---------SIACSKGEPPTPSDSSGTG 819
            ....||  .:||.|..|.....|.:|....|...|         |:..:.|.|.|....|..|
Mouse   396 LSALWH--PDCFVCRECLAPFSGGSFFEHEGRPLCENHFHAQRGSLCATCGLPVTGRCVSALG 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 5/94 (5%)
LIM1_Prickle 624..682 CDD:188799 19/57 (33%)
LIM2_Prickle 687..742 CDD:188802 20/54 (37%)
LIM3_Prickle 747..805 CDD:188804 16/66 (24%)
Tgfb1i1XP_036008777.1 Paxillin 4..>128 CDD:397550 34/158 (22%)
LIM1_Paxillin_like 263..315 CDD:259830 19/57 (33%)
LIM2_Paxillin_like 322..373 CDD:188723 18/51 (35%)
LIM 381..433 CDD:413332 15/55 (27%)
LIM4_Leupaxin 440..491 CDD:188796 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593918at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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