DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and Fhl4

DIOPT Version :10

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:NP_034344.2 Gene:Fhl4 / 14202 MGIID:1338765 Length:279 Species:Mus musculus


Alignment Length:159 Identity:50/159 - (31%)
Similarity:75/159 - (47%) Gaps:6/159 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   649 WHPACFACSVCRELLVDLIYFHRDGRMYCGRHHAETLKPRCSAC-DEIILADECTEAEGRAWHMN 712
            ||..||.||.|.:||....:...|..:.|.:.......|:|..| .:|...|...|.:|..||.|
Mouse    60 WHNTCFKCSKCSQLLATETFVAWDKNILCNKCA
TRVTFPKCKGCLKDIEEGDHNVEYKGSIWHKN 124

  Fly   713 HFACHECDKQLGGQRYIMREGKPYCLHCFDAMFAEYCDYCGEAIGVDQGQMSHDGQHWHATDECF 777
            .|.|..|...:|.:.:..::...||:.|:||:|.::|..|.:.|  ..|.:|:..|.||:  |||
Mouse   125 CFVCTNCKDIIGTKNFFPKDEGFYCVTCYDALF
TKHCMKCKKPI--TSGGVSYQDQPWHS--ECF 185

  Fly   778 SCNTCRCSLLGRAFLPRRGAIYCSIACSK 806
            .|.:|...|.|:.|.......:| :.|.|
Mouse   186 VCVSCSKELSGQRFTAMDDQYFC-VDCYK 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602
LIM1_Prickle 624..682 CDD:188799 11/32 (34%)
LIM2_Prickle 687..742 CDD:188802 17/55 (31%)
LIM3_Prickle 747..805 CDD:188804 17/57 (30%)
Fhl4NP_034344.2 LIM <4..32 CDD:413332
LIM 39..92 CDD:413332 11/31 (35%)
LIM2_FHL1 100..157 CDD:188808 18/56 (32%)
LIM3_FHL1 161..213 CDD:188813 18/56 (32%)
LIM4_FHL1 216..279 CDD:188734
Blue background indicates that the domain is not in the aligned region.

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