DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pk and WTIP

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:XP_011524754.1 Gene:WTIP / 126374 HGNCID:20964 Length:472 Species:Homo sapiens


Alignment Length:479 Identity:104/479 - (21%)
Similarity:154/479 - (32%) Gaps:141/479 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 PGAG-MGPGPGSGAAAGPPLGPQYSPGCSANPK-----YSNAQLPPPPHHHHQLSPALSTP---S 488
            ||.| .||.||.|..|.|.|| :...| |..|:     .|..:..|    .....|.||..   |
Human    30 PGRGRRGPRPGPGDEAAPALG-RRGKG-SGGPEAGADGLSRGERGP----RRAAVPELSAQPAGS 88

  Fly   489 PPSLLHHPAGGTSSASAHA----------------------PFLGGPHMDMQRQSHSDDDS-GCA 530
            |.:.|....||....||.:                      |..|.|.:...|.|.|...| |.|
Human    89 PRASLAGSDGGGGGGSARSSGISLGYDQRHGSPRSGRSDPRPGPGPPSVGSARSSVSSLGSRGSA 153

  Fly   531 LEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSPGEQYRVRQLLHQLPPHDNEVRYCHSLTDEER 595
            .....::|||..|...|   |..|....|:               .||          :|.....
Human   154 GAYADFLPPGACPAPAR---SPEPAGPAPF---------------PLP----------ALPLPPG 190

  Fly   596 KELRLFSTQRKRDALGRGNVRQLMSARPCDGCDDLISTGDIAVFATRLGPNAS---WHPACFACS 657
            :|....:.:|:.:||.|...|.|.:....|.....|..| :.::..:....|.   :|..||.|.
Human   191 REGGPSAAERRLEALTRELERALEARTARDYFGICIKCG-LGIYGAQQACQAMGSLYHTDCFTCD 254

  Fly   658 VCRELLVDLIYFHRDGRMYCGRHHA----ETLKPRCSACDEIILADECTEAEGRAWHMNHFACHE 718
            .|...|....:::...::||.....    :....:||.|..:|: :...:|.|:::|...|.|..
Human   255 SCGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIM-EMILQALGKSYHPGCFRCSV 318

  Fly   719 CDKQLGGQRYIMR-EGKPYCLHCFDAMFAEYCDYCGEAIGVDQG--------QMSHDGQHWHATD 774
            |::.|.|..:.:. |...||:..:..:||..|..|...|...||        .|..|   :|.. 
Human   319 CNECLDGVPFTVDVENNIYCVRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRD---YHVA- 379

  Fly   775 ECFSCNTCRCSLLGRAFLPRRGAIYCSIACSKGEPPTPSDSSGTGMYTTPTPPTQRVRPHPQAPL 839
             |:.|.                        ..|:....:||:                     ||
Human   380 -CYHCE------------------------DPGDEARMADSN---------------------PL 398

  Fly   840 PARIP-------SSHASSSPPMSP 856
            .|.:|       ...:|..||:.|
Human   399 AASLPCMEQLSLGCRSSCVPPLPP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 21/95 (22%)
LIM1_Prickle 624..682 CDD:188799 12/60 (20%)
LIM2_Prickle 687..742 CDD:188802 15/55 (27%)
LIM3_Prickle 747..805 CDD:188804 10/65 (15%)
WTIPXP_011524754.1 LIM1_Ajuba_like 225..278 CDD:188738 11/53 (21%)
LIM2_Ajuba_like 290..342 CDD:188741 15/52 (29%)
LIM 350..404 CDD:295319 16/103 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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