DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and Lpxn

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:NP_598913.1 Gene:Lpxn / 107321 MGIID:2147677 Length:386 Species:Mus musculus


Alignment Length:345 Identity:93/345 - (26%)
Similarity:134/345 - (38%) Gaps:67/345 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 HMDMQRQSHSDDDSGCALEEYTWVPPG-LRPDQVRL----------YFSQIPDDK---VPYVNSP 564
            |:|.|    |.::|.......|....| ..|.:|:|          .:|::.:.|   :|...|.
Mouse    29 HLDQQ----STEESKIPQTPKTLSSQGNTSPLKVQLVYATNIQEPNVYSEVQEPKESVLPPKTSA 89

  Fly   565 GEQYRVRQLLHQLPPHDNEVRYCHSL-TDEERKEL------------RLFSTQRKRDALGRGNVR 616
            ..|      |.:|..|.:|::...|: .|..||.|            .|...:::...||...| 
Mouse    90 AAQ------LDELMAHLSEMQAKVSVKADTSRKPLPDQQDHKASLDSMLGDLEQELQDLGIATV- 147

  Fly   617 QLMSARP---CDGCDDLISTGDIAVFATRLGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCG 678
                  |   |..|...|: |.: :.|  ||  .||||..|.|:.|:|.|....:|.|.|..||.
Mouse   148 ------PKGYCASCQKPIA-GKV-IHA--LG--QSWHPEHFVCTHCKEELGSSPFFERSGLAYCS 200

  Fly   679 RHHAETLKPRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRYIMREGKPYCLHCFDA 743
            :.:.....|||:.|...| .|:...|..:.||..||.|..|.:..|.:.:..::.||||...|.|
Mouse   201 KDYHRLFSPRCAYCAAPI-TDKVLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFLA 264

  Fly   744 MFAEYCDYCGEAIGVDQGQMSHDGQHWHATDECFSCNTCRCSLLGRAFLPRRGAIYCSI------ 802
            ||:..|..|...  |.:..:|.....||  .|||.|..|..|....:|....|..:|.:      
Mouse   265 MFSPKCGGCNRP--VLENYLSAMNTVWH--PECFVCGDCFSSFSSGSFFELDGRPFCELHYHHRR 325

  Fly   803 --ACSK-GEPPTPSDSSGTG 819
              .|.. |:|.|....|..|
Mouse   326 GTLCHDCGQPITGRCISAMG 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 25/121 (21%)
LIM1_Prickle 624..682 CDD:188799 21/57 (37%)
LIM2_Prickle 687..742 CDD:188802 18/54 (33%)
LIM3_Prickle 747..805 CDD:188804 15/65 (23%)
LpxnNP_598913.1 LD motif 1 3..15
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..52 6/26 (23%)
LD motif 2 70..82 2/11 (18%)
LD motif 3 92..103 4/16 (25%)
LIM 150..204 CDD:295319 21/59 (36%)
LIM 211..262 CDD:295319 16/51 (31%)
LIM 270..322 CDD:295319 15/55 (27%)
LIM4_Paxillin_like 329..380 CDD:188725 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593918at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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