DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pk and Wtip

DIOPT Version :9

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:NP_997095.1 Gene:Wtip / 101543 MGIID:2141920 Length:398 Species:Mus musculus


Alignment Length:500 Identity:111/500 - (22%)
Similarity:172/500 - (34%) Gaps:153/500 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 GAAQQESNEPISRTPLTQISYLQKIPTLPRHFSP-SGQGLATPPALGSGGMGLPSSSSASALYAA 404
            |...:|| ||.:.:|    ..:::.|......:| ||:       .|.||.|.|.          
Mouse    17 GLGLRES-EPTAGSP----GRVRRGPRAVDEAAPASGR-------RGKGGCGGPE---------- 59

  Fly   405 QAAAGILPTSPLPLQRHQQYLPPHHQQHPGAGM-GPGPGSGAAAGPPLG--PQYSPGCSANPKYS 466
              ||..:|:.|              ::.|.|.: |...||..::|..||  .::.||        
Mouse    60 --AAPDVPSRP--------------ERGPRASLAGSDGGSARSSGISLGYDQRHGPG-------- 100

  Fly   467 NAQLPPPPHHHHQLSPALSTPSPPSLLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDDDSG-CA 530
                                |.|||      ||::.:|..:  ||           |...:| ||
Mouse   101 --------------------PGPPS------GGSARSSVSS--LG-----------SRGSAGACA 126

  Fly   531 LEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSPGEQYRVRQLLHQLPPHDNEVRYCHSLTDEER 595
                ..:|||:.|                   :|.......|....||          ||.....
Mouse   127 ----DLLPPGVGP-------------------APARSPEPAQFPFPLP----------SLPLPPG 158

  Fly   596 KELRLFSTQRKRDALGRGNVRQLMSARPCDGCDDLISTGDIAVFATRLGPNAS---WHPACFACS 657
            :|....:.:|:.:||.|...|.|.:....|.....|..| :.::..|....|.   :|..||.|.
Mouse   159 REGGPSAAERRLEALTRELERALEARTARDYFGICIKCG-LGIYGARQACQAMGSLYHTDCFICD 222

  Fly   658 VCRELLVDLIYFHRDGRMYCGRHHA----ETLKPRCSACDEIILADECTEAEGRAWHMNHFACHE 718
            .|...|....:::...::||.....    :....:||.|..:|: :...:|.|:::|...|.|..
Mouse   223 SCGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIM-EMILQALGKSYHPGCFRCSV 286

  Fly   719 CDKQLGGQRYIMR-EGKPYCLHCFDAMFAEYCDYCGEAIGVDQG--------QMSHDGQHWHATD 774
            |::.|.|..:.:. :...||:..:..:||..|..|...|...||        .|..|   :|.  
Mouse   287 CNECLDGVPFTVDVDNNIYCVRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRD---YHV-- 346

  Fly   775 ECFSCNTCRCSLL---GRAFLPRRGAIYCSIAC---SKGEPPTPS 813
            ||:.|..|...|.   ||...|..|.:.|. .|   ..|:.|.||
Mouse   347 ECYHCEDCGLQLSGEEGRRCYPLEGHLLCR-RCHLRRLGQGPLPS 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 20/95 (21%)
LIM1_Prickle 624..682 CDD:188799 13/60 (22%)
LIM2_Prickle 687..742 CDD:188802 14/55 (25%)
LIM3_Prickle 747..805 CDD:188804 19/71 (27%)
WtipNP_997095.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..166 53/266 (20%)
LIM1_Ajuba_like 193..246 CDD:188738 12/53 (23%)
LIM2_Ajuba_like 258..310 CDD:188741 14/52 (27%)
LIM3_Ajuba_like 318..379 CDD:188822 18/66 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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