DRSC/TRiP Functional Genomics Resources

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Protein Alignment pk and atxn7l1

DIOPT Version :10

Sequence 1:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster
Sequence 2:XP_002933154.2 Gene:atxn7l1 / 100498036 XenbaseID:XB-GENE-1011002 Length:850 Species:Xenopus tropicalis


Alignment Length:751 Identity:147/751 - (19%)
Similarity:224/751 - (29%) Gaps:248/751 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   701 CTEA-EGRAWHMNHFACHECDKQLGGQRYIMREGKPYC-------LHCFDAMFAEYCDYCG---- 753
            |..| ||:.......|....|:::......:  |||:.       |||.|....|.....|    
 Frog    16 CRSASEGKEKQQEGRAMATLDRKVPSPEAFL--GKPWSSWIDAAKLHCSDNGDLEETGKEGGKSR 78

  Fly   754 EAIGVDQGQMSHDGQHWHATDECF--SCNTCRCSLLGRAF---LPRRGAIYCSIACSKGEPPTPS 813
            |.:.:::..| |...|:...|:.:  .||.|...:..:.|   ..||....|.        |:||
 Frog    79 EVMRLNKEDM-HLFGHYPGHDDFYLVVCNVCNQVVKPQVFQSHCERRHGSMCK--------PSPS 134

  Fly   814 DSSGTGMYTTPTPPTQRVRPHPQAPLPARIPSSHASSSPPMSPQQQQQHQATFNQAMYQMQSQQM 878
            .:|.                      |:.|..||....|  .|.....:....|...::.....:
 Frog   135 PASS----------------------PSNIKPSHVQMKP--KPCMSSHNPVNSNSKPFKAPRDNL 175

  Fly   879 EAAGGLVDQSKSYAASDSDAG--------VVKDLE--------HGGHMGGGDLTDFSGGRASSTS 927
                 |...:|.:.|..|...        .|..||        .|.::....:|:.|...|||.|
 Frog   176 -----LTSNNKQHTAFSSKVSRDKPCVPVPVVSLEKIPNLVKADGANVKMNSVTNSSTTAASSAS 235

  Fly   928 QNLSPLNSPGDFQPHFLPKPME--LQRDGVYNFNEMSSNLDAAWSAKPTNSYH---LQRQLLENP 987
               |....|.  .|..:|:..|  |...|:........|     ..|.:|..:   .:|:...|.
 Frog   236 ---SLPKQPA--VPKTVPQSPEKILNGKGIGTLERKHQN-----GTKTSNKPYKRLSEREFDPNK 290

  Fly   988 H----------------TASMPELAGKLVAPPAHMQ-------HLSQL----------HAVSSHQ 1019
            |                |.....|..:...|....|       |.::.          ||.||.:
 Frog   291 HCGVLDPETKKPCTRSLTCKTHSLNHRRAVPGRKKQFDILLAEHKARSREKEVTKDKEHAPSSRE 355

  Fly  1020 FQQHEYADILHPPPPPPGE------IPELPTPNLSVASTALPP-ELMGSPTHSAGDRSLNTPMST 1077
            ..|.:        |.|..|      :..:|.|.::..:.:.|. ..:..||.:   .|:|:..|:
 Frog   356 THQSQ--------PTPAQEQSSGVALNSVPEPKVTSPAKSRPQNSALPRPTSA---NSINSASSS 409

  Fly  1078 QSASHAPPHPVSILSG--ASSSSPMSGEPAKKKGVRFEGIPDTLPRSRSYSGN----------GA 1130
            ..::..|..|||.:.|  ||..|...||        .||:.:|......|||:          |:
 Frog   410 NHSAFVPEPPVSSVGGDLASRLSSDEGE--------VEGVEETEKLDCFYSGHHPKPLAFCSFGS 466

  Fly  1131 GTSGGGERERDRDKDKEGGGRHGHGHSSRRRRRRKSSSSSSHHRSGSGHRSHSTTRADTYAPAQP 1195
            ...|.|....||..|              |.|...:|....|..|....:......:...:|...
 Frog   467 RLMGRGYYVFDRRWD--------------RFRFALNSMVEKHLNSQMWKKIPPAADSPMPSPVTH 517

  Fly  1196 LSSSYQGPPSVLQA---ANLVH-ESPSRQQREREREREREESEESDVCSTCSSSSSSSEDYMMMY 1256
            :|||:  |.||||.   .|.|: .||....|           ..|....|....::.:.|...:.
 Frog   518 VSSSF--PASVLQPFSNPNSVYLSSPGTNSR-----------TTSSYMVTSGMLTNMAADTNSLT 569

  Fly  1257 QLPQR-RHYGGV------------RVSYVP---------------------------NDALAYDR 1281
            ..|.. .|..|.            .||.||                           ::.|:.:|
 Frog   570 SHPNAFSHATGTLNIVDSTFKSPSAVSPVPTLTPSPSQKPSKTKPSKSSKIKDLSSRSEELSGNR 634

  Fly  1282 KRKP------------------SELGGDKDKNCIIS 1299
            |:||                  |...|...|||:::
 Frog   635 KKKPQTTSSSTSSSLPLQTSSTSSFSGSHKKNCVLN 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkNP_724538.1 PET_Prickle 523..618 CDD:193602
LIM1_Prickle 624..682 CDD:188799
LIM2_Prickle 687..742 CDD:188802 12/48 (25%)
LIM3_Prickle 747..805 CDD:188804 14/66 (21%)
atxn7l1XP_002933154.2 SCA7 278..339 CDD:462422 8/60 (13%)
Blue background indicates that the domain is not in the aligned region.

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