DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MTM1 and mtm1

DIOPT Version :10

Sequence 1:XP_047298088.1 Gene:MTM1 / 4534 HGNCID:7448 Length:625 Species:Homo sapiens
Sequence 2:NP_001015828.1 Gene:mtm1 / 548545 XenbaseID:XB-GENE-1002030 Length:602 Species:Xenopus tropicalis


Alignment Length:618 Identity:476/618 - (77%)
Similarity:542/618 - (87%) Gaps:16/618 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     8 MASASTSKYNSHSLENESIKRTSRDGVNRDLTEAVPRLPGETLITDKEVIYICPFNGPIKGRVYI 72
            |||.||.||||:|||| |::|:..||:|.:..:.:|.||||.|||||:|||:|||.||:|||:::
 Frog     1 MASNSTPKYNSNSLEN-SLRRSPGDGMNHEQNDEIPCLPGEALITDKDVIYMCPFYGPVKGRIHV 64

Human    73 TNYRLYLRSLETLSSHWRFEVDTCLFQDSSLILDVPLGVISRIEKMGGATSRGENSYGLDITCKD 137
            |||:||.:..|               .:..:...||||||:||||||||:|||||||||||||||
 Frog    65 TNYKLYFKGEE---------------MEPLISFSVPLGVIARIEKMGGASSRGENSYGLDITCKD 114

Human   138 MRNLRFALKQEGHSRRDMFEILTRYAFPLAHSLPLFAFLNEEKFNVDGWTVYNPVEEYRRQGLPN 202
            |||||||||||.|||:.:||.||:|||||:|.|.||||.|||||..:||.||:.:.|:|||||||
 Frog   115 MRNLRFALKQEVHSRKQIFEDLTKYAFPLSHGLLLFAFQNEEKFPENGWAVYDAMTEFRRQGLPN 179

Human   203 HHWRITFINKCYELCDTYPALLVVPYRASDDDLRRVATFRSRNRIPVLSWIHPENKTVIVRCSQP 267
            ..||||||||.||||||||.||||||.||::||::||.||||||||||||:||||::.|:|||||
 Frog   180 GQWRITFINKNYELCDTYPPLLVVPYSASEEDLKKVAAFRSRNRIPVLSWLHPENQSAIMRCSQP 244

Human   268 LVGMSGKRNKDDEKYLDVIRETNKQISKLTIYDARPSVNAVANKATGGGYESDDAYHNAELFFLD 332
            |||||||||||||:|||:||:||.|.||||||||||:|||||||||||||||:|||.||||.|||
 Frog   245 LVGMSGKRNKDDERYLDIIRDTNGQTSKLTIYDARPNVNAVANKATGGGYESEDAYPNAELVFLD 309

Human   333 IHNIHVMRESLKKVKDIVYPNVEESHWLSSLESTHWLEHIKLVLTGAIQVADKVSSGKSSVLVHC 397
            |||||||||||||:||||||||||||||||||||||||||||||||||||||||:||||||:|||
 Frog   310 IHNIHVMRESLKKLKDIVYPNVEESHWLSSLESTHWLEHIKLVLTGAIQVADKVASGKSSVVVHC 374

Human   398 SDGWDRTAQLTSLAMLMLDSFYRSIEGFEILVQKEWISFGHKFASRIGHGDKNHTDADRSPIFLQ 462
            ||||||||||||||||||||:||:|.|||:|||||||||||||:||||||||||.||||||||||
 Frog   375 SDGWDRTAQLTSLAMLMLDSYYRTIVGFEVLVQKEWISFGHKFSSRIGHGDKNHADADRSPIFLQ 439

Human   463 FIDCVWQMSKQFPTAFEFNEQFLIIILDHLYSCRFGTFLFNCESARERQKVTERTVSLWSLINSN 527
            ||||||||||||||||||||.|||.:|||||||||||||:|||:.|:::||.|:|.||||||:|.
 Frog   440 FIDCVWQMSKQFPTAFEFNEHFLITVLDHLYSCRFGTFLYNCENIRDKEKVREKTQSLWSLISSE 504

Human   528 KEKFKNPFYTKEINRVLYPVASMRHLELWVNYYIRWNPRIKQQQPNPVEQRYMELLALRDEYIKR 592
            |.|:.|||||||:|||||||||||||||||||||||||||:|||||||||||||||||||:|::|
 Frog   505 KSKYTNPFYTKELNRVLYPVASMRHLELWVNYYIRWNPRIRQQQPNPVEQRYMELLALRDDYVRR 569

Human   593 LEELQLANSAKLSDPPTSPSSPSQMMPHVQTHF 625
            |||||:.||.|::...||||||||:||.|.|.|
 Frog   570 LEELQITNSPKMNSSTTSPSSPSQIMPQVHTPF 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTM1XP_047298088.1 PH-like 51..165 CDD:473070 70/113 (62%)
Myotub-related 184..511 CDD:461958 279/326 (86%)
mtm1NP_001015828.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 18/31 (58%)
PH-like 43..142 CDD:473070 70/113 (62%)
Myotub-related 159..482 CDD:461958 276/322 (86%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..602 16/27 (59%)

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