DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MTM1 and Mtm1

DIOPT Version :10

Sequence 1:XP_047298088.1 Gene:MTM1 / 4534 HGNCID:7448 Length:625 Species:Homo sapiens
Sequence 2:NP_001013065.2 Gene:Mtm1 / 288762 RGDID:1304582 Length:603 Species:Rattus norvegicus


Alignment Length:618 Identity:487/618 - (78%)
Similarity:557/618 - (90%) Gaps:15/618 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     8 MASASTSKYNSHSLENESIKRTSRDGVNRDLTEAVPRLPGETLITDKEVIYICPFNGPIKGRVYI 72
            |||:|.|..::|.:|.||:::.|:|||.:|::::.||||||:.||||||||||||:||:|||:||
  Rat     1 MASSSASDCDAHPVERESMRKVSQDGVRQDMSKSGPRLPGESAITDKEVIYICPFSGPVKGRLYI 65

Human    73 TNYRLYLRSLETLSSHWRFEVDTCLFQDSSLILDVPLGVISRIEKMGGATSRGENSYGLDITCKD 137
            ||||||||||||               |.:.|||||||||||||||||.||||||||||||||||
  Rat    66 TNYRLYLRSLET---------------DLAPILDVPLGVISRIEKMGGVTSRGENSYGLDITCKD 115

Human   138 MRNLRFALKQEGHSRRDMFEILTRYAFPLAHSLPLFAFLNEEKFNVDGWTVYNPVEEYRRQGLPN 202
            :||||||||||||||||:|::|||:|||||::||||||:|||||.||||.:|||||||||||||:
  Rat   116 LRNLRFALKQEGHSRRDIFDVLTRHAFPLAYNLPLFAFVNEEKFKVDGWAIYNPVEEYRRQGLPD 180

Human   203 HHWRITFINKCYELCDTYPALLVVPYRASDDDLRRVATFRSRNRIPVLSWIHPENKTVIVRCSQP 267
            .||||:|:|:.||||||||||||||||||||||||||||||||||||||||||||:..|:|||||
  Rat   181 RHWRISFVNQRYELCDTYPALLVVPYRASDDDLRRVATFRSRNRIPVLSWIHPENRAAIMRCSQP 245

Human   268 LVGMSGKRNKDDEKYLDVIRETNKQISKLTIYDARPSVNAVANKATGGGYESDDAYHNAELFFLD 332
            |||:.|||::|||:|||:|||||||.||||||||||.||||||||||||||.:|||.:|||.|||
  Rat   246 LVGVGGKRSRDDERYLDIIRETNKQTSKLTIYDARPGVNAVANKATGGGYEGEDAYPHAELSFLD 310

Human   333 IHNIHVMRESLKKVKDIVYPNVEESHWLSSLESTHWLEHIKLVLTGAIQVADKVSSGKSSVLVHC 397
            |||||||||||::|:|||||:|||:|||||||||||||||||:|||||:|||||:||.|||||||
  Rat   311 IHNIHVMRESLRRVRDIVYPHVEEAHWLSSLESTHWLEHIKLLLTGAIRVADKVASGLSSVLVHC 375

Human   398 SDGWDRTAQLTSLAMLMLDSFYRSIEGFEILVQKEWISFGHKFASRIGHGDKNHTDADRSPIFLQ 462
            |||||||||||:|||||||.|||||||||||||||||||||||:||||||||||.||||||||||
  Rat   376 SDGWDRTAQLTTLAMLMLDGFYRSIEGFEILVQKEWISFGHKFSSRIGHGDKNHADADRSPIFLQ 440

Human   463 FIDCVWQMSKQFPTAFEFNEQFLIIILDHLYSCRFGTFLFNCESARERQKVTERTVSLWSLINSN 527
            ||||||||:|||||||||||.||:.||||||||||||||.|||:|||||::.|||||:|||||||
  Rat   441 FIDCVWQMTKQFPTAFEFNECFLVAILDHLYSCRFGTFLLNCEAARERQRLAERTVSVWSLINSN 505

Human   528 KEKFKNPFYTKEINRVLYPVASMRHLELWVNYYIRWNPRIKQQQPNPVEQRYMELLALRDEYIKR 592
            |::|.||||.:|.|||:|||.|:|||||||||||||||||:||||:|:||||.|||||||:|||:
  Rat   506 KDEFTNPFYARESNRVIYPVTSVRHLELWVNYYIRWNPRIRQQQPHPMEQRYNELLALRDDYIKK 570

Human   593 LEELQLANSAKLSDPPTSPSSPSQMMPHVQTHF 625
            |||||||...||:|..|.||..:|:.|.:||||
  Rat   571 LEELQLATPTKLTDSSTPPSGSAQIAPRMQTHF 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTM1XP_047298088.1 PH-like 51..165 CDD:473070 86/113 (76%)
Myotub-related 184..511 CDD:461958 282/326 (87%)
Mtm1NP_001013065.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40 17/38 (45%)
PH-like 44..143 CDD:473070 86/113 (76%)
Myotub-related 162..489 CDD:461958 282/326 (87%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 579..603 10/23 (43%)

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