DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MTM1 and mtm-1

DIOPT Version :10

Sequence 1:XP_047298088.1 Gene:MTM1 / 4534 HGNCID:7448 Length:625 Species:Homo sapiens
Sequence 2:NP_491531.2 Gene:mtm-1 / 172148 WormBaseID:WBGene00003475 Length:588 Species:Caenorhabditis elegans


Alignment Length:609 Identity:260/609 - (42%)
Similarity:372/609 - (61%) Gaps:50/609 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    10 SASTSKYNSHSLENESIKRTSRDGVNRDLTEAVPRLPGETLI-TDKEVIYICPFNGPIKGRVYIT 73
            |....::.|.|:..|||          ||    ..|..|:|| |:|.|.|..|. |...|::.||
 Worm     8 SGEVGEFASSSMIQESI----------DL----KLLAAESLIWTEKNVTYFGPL-GKFPGKIVIT 57

Human    74 NYRLYLRSLE--TLSSHWRFEVDTCLFQDSSLILDVPLGVISRIEKMGGATS----RGENSYGLD 132
            .||:.....:  .:...|:              ||:|||.:|||||:|..|:    ||:::||..
 Worm    58 RYRMVFLVGDGGKMYEQWK--------------LDIPLGQVSRIEKVGRKTTSVAKRGDDNYGFT 108

Human   133 ITCKDMRNLRFALKQEGHSRRDMFEILTRYAFPLAHSLPLFAFLN---EEKFNVDGWTVYNPVEE 194
            |.|||.|..||........|:::.:.|.||||||:|:||:||.::   ..:...|||.:|:..:|
 Worm   109 IYCKDYRVYRFTCNPASSDRKNVCDSLNRYAFPLSHNLPMFASVHAAETPRLMKDGWKIYSAEKE 173

Human   195 YRRQGLPNHH-WRITFINKCYELCDTYPALLVVP---YRASDDDLRRVATFRSRNRIPVLSWIHP 255
            |.|.|:||.. |:...|||.|:..:|||...|:|   :......::::..|||:.||||||||:.
 Worm   174 YERLGIPNSRLWKEVDINKDYKFSETYPRTFVIPTVSWEEGKPFVKKLGEFRSKERIPVLSWINQ 238

Human   256 ENKTVIVRCSQPLVGMSGKRNKDDEKYLDVIRETNKQISKLTIYDARPSVNAVANKATGGGYESD 320
            .....|.|||||:.|:||||:.:||::|..|...|....:|.|.||||:|||..|||.|||||.:
 Worm   239 TTLASISRCSQPMTGISGKRSAEDERHLTNIMNANANCRELLILDARPAVNAKLNKAKGGGYEEN 303

Human   321 DAYHNAELFFLDIHNIHVMRESLKKVKDIVYPNVEESHWLSSLESTHWLEHIKLVLTGAIQVADK 385
              |.||.|.||:||||||:|:|||::...:.|.|:|..:..:|:.:.||.|::.:|.||::....
 Worm   304 --YVNAPLTFLNIHNIHVVRDSLKRLLAALIPRVDEKGYYKALDESKWLNHVQSILEGAVKAVFN 366

Human   386 VSSGKSSVLVHCSDGWDRTAQLTSLAMLMLDSFYRSIEGFEILVQKEWISFGHKFASRIGHGDKN 450
            |.:.|.|||:|||||||||||||||||:.|||:||:||||.:|::|||.||||||..||||||.|
 Worm   367 VDTEKQSVLIHCSDGWDRTAQLTSLAMIQLDSYYRTIEGFIVLIEKEWCSFGHKFGERIGHGDDN 431

Human   451 HTDADRSPIFLQFIDCVWQMSKQFPTAFEFNEQFLIIILDHLYSCRFGTFLFNCESAR-ERQKVT 514
            ::|.:|||:|:||.||:||:.:|||.||||.::.||.:||.||:||:||||:|.|..| :.:|..
 Worm   432 YSDGERSPVFVQFCDCLWQIMRQFPWAFEFTQELLICMLDELYACRYGTFLYNSEKIRLKDKKCD 496

Human   515 ERTVSLWSLINSNKEKFKNPFYTK-EINRVLYPVASMRHLELWVNYYIRWNPRIKQQQPNPVEQR 578
            |.|:|.||.:..||:||:||.:.. :.|:|:....|:..|.:|::||.|.||.:.......|:|.
 Worm   497 ETTISFWSYVLENKKKFRNPMFKHGKSNKVINVNPSLCGLHVWIDYYARSNPYVVTPNHEDVQQP 561

Human   579 YMELLALRDEYIKRLEELQLANSA 602
            ..:.:   ||..:.|:|:...:.|
 Worm   562 GAQFV---DEKKQLLDEIMALDDA 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTM1XP_047298088.1 PH-like 51..165 CDD:473070 41/120 (34%)
Myotub-related 184..511 CDD:461958 171/331 (52%)
mtm-1NP_491531.2 PH-GRAM_MTM-like 36..141 CDD:275407 40/119 (34%)
Myotub-related 163..489 CDD:461958 170/327 (52%)

Return to query results.
Submit another query.