DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and olig4

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001039180.1 Gene:olig4 / 734024 XenbaseID:XB-GENE-484736 Length:209 Species:Xenopus tropicalis


Alignment Length:106 Identity:37/106 - (34%)
Similarity:58/106 - (54%) Gaps:21/106 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 KTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVPAYA---STQKLSKL 307
            |.|...:::.:||         |.|::.|:|||.|:|.::.|.:.||:.:| |:   |.:||||:
 Frog    45 KAGKRELTQENQH---------ELRLKVNSRERQRMHDLNQAMDGLREVMP-YSHGPSVRKLSKI 99

  Fly   308 SVLRVACSYILTLS-------RMAGEDYSADQSVPSIATCL 341
            |.|.:|.:||:.||       |:..|.|.| |..|..|:.|
 Frog   100 STLILARNYIVMLSNSLEEMKRLVNEVYGA-QRAPGCASSL 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 27/76 (36%)
olig4NP_001039180.1 bHLH_TS_OLIG2_like 59..121 CDD:381568 24/62 (39%)

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