DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment net and TFAP4

DIOPT Version :9

Sequence 1:NP_001259789.1 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_003214.1 Gene:TFAP4 / 7023 HGNCID:11745 Length:338 Species:Homo sapiens


Alignment Length:77 Identity:26/77 - (33%)
Similarity:45/77 - (58%) Gaps:9/77 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 LAPISRPHQHQRNYKNMTRERRIE---ANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVL 310
            ||.|....:.||:     :||||.   ||:.||.|:.:|:|.:::|:..:| :...:||||.::|
Human    31 LANIPLTPETQRD-----QERRIRREIANSNERRRMQSINAGFQSLKTLIP-HTDGEKLSKAAIL 89

  Fly   311 RVACSYILTLSR 322
            :....||.:|.:
Human    90 QQTAEYIFSLEQ 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_001259789.1 HLH 269..320 CDD:278439 19/53 (36%)
TFAP4NP_003214.1 HLH 49..100 CDD:306515 16/51 (31%)
Leucine-zipper 1 100..120 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..141
Leucine-zipper 2 151..179
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..338
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.