DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and Olig1

DIOPT Version :9

Sequence 1:NP_001259789.1 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_068538.2 Gene:Olig1 / 60394 RGDID:621129 Length:261 Species:Rattus norvegicus


Alignment Length:128 Identity:33/128 - (25%)
Similarity:61/128 - (47%) Gaps:25/128 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LIG-KQPSAKKTLKERTQKESTSSSFLEASLSDEDLNKTGLAPISRPH---------QHQRNYKN 264
            |:| :||....:        |::||...|||..:...:...||::.|.         :.....:.
  Rat    35 LVGYRQPPISSS--------SSTSSSSTASLLPKPAREKPEAPLAEPRGPAPESGGARADAKEEQ 91

  Fly   265 MTRERRIEANARERTRVHTISAAYETLRQAVPAYAST-------QKLSKLSVLRVACSYILTL 320
            ..::.|.:.|:|||.|:..::.|.:.||:.:..|::.       :||||::.|.:|.:|||.|
  Rat    92 QQQQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARNYILLL 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_001259789.1 HLH 269..320 CDD:278439 19/57 (33%)
Olig1NP_068538.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..105 13/71 (18%)
bHLH_TS_OLIG1 96..165 CDD:381512 20/59 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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