DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and twist1b

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001017820.1 Gene:twist1b / 550518 ZFINID:ZDB-GENE-050417-357 Length:169 Species:Danio rerio


Alignment Length:136 Identity:38/136 - (27%)
Similarity:63/136 - (46%) Gaps:38/136 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 KQPSAKK--------TLKERTQKESTSSSFLEASLSDEDLNKTGLAPISRPHQHQRNYKNMTRER 269
            |:.|:||        ||.:|.:|.|.||:   :..|.|:|                      :.:
Zfish    37 KRRSSKKNGEDSDSSTLGKRGKKSSNSSN---SPQSFEEL----------------------QTQ 76

  Fly   270 RIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQSV 334
            |:.||.|||.|..:::.|:..||:.:|...| .||||:..|::|..||..|.::    ..:|:..
Zfish    77 RVMANVRERQRTQSLNEAFAALRKIIPTLPS-DKLSKIQTLKLAARYIDFLCQV----LQSDELD 136

  Fly   335 PSIATC 340
            ..:|:|
Zfish   137 SKMASC 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 21/66 (32%)
twist1bNP_001017820.1 bHLH_TS_TWIST1 65..141 CDD:381418 25/105 (24%)

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