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Protein Alignment net and Neurod6
DIOPT Version :9
Sequence 1: | NP_001259789.1 |
Gene: | net / 45339 |
FlyBaseID: | FBgn0002931 |
Length: | 360 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102707.1 |
Gene: | Neurod6 / 500137 |
RGDID: | 1562793 |
Length: | 337 |
Species: | Rattus norvegicus |
Alignment Length: | 135 |
Identity: | 52/135 - (38%) |
Similarity: | 74/135 - (54%) |
Gaps: | 12/135 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 193 KQCVDQAG-PKIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDEDLNKTGLAPISRPH 256
:||.||.. .|.|:|...::.:..|.|:...|.|:||.. |....:||.| || |..|..
Rat 23 RQCEDQKQIKKPESFPKQVVLRGKSIKRAPGEETEKEEE-----EEDREEEDEN--GL-PRRRGL 79
Fly 257 QHQRNYK---NMTRERRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYIL 318
:.::..| ...:.||.|||||||.|:|.::.|.:.||:.||.|:.||||||:..||:|.:||.
Rat 80 RKKKTTKLRLERVKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIW 144
Fly 319 TLSRM 323
.||.:
Rat 145 ALSEI 149
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
net | NP_001259789.1 |
HLH |
269..320 |
CDD:278439 |
28/50 (56%) |
Neurod6 | NP_001102707.1 |
HLH |
100..151 |
CDD:197674 |
26/50 (52%) |
Neuro_bHLH |
153..272 |
CDD:315246 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3898 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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