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Protein Alignment net and olig3
DIOPT Version :9
Sequence 1: | NP_001259789.1 |
Gene: | net / 45339 |
FlyBaseID: | FBgn0002931 |
Length: | 360 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001008191.1 |
Gene: | olig3 / 493553 |
XenbaseID: | XB-GENE-919789 |
Length: | 263 |
Species: | Xenopus tropicalis |
Alignment Length: | 122 |
Identity: | 41/122 - (33%) |
Similarity: | 63/122 - (51%) |
Gaps: | 23/122 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 229 STSSSFLEASLSDEDLNKTGLAPISRPHQHQRNYK-------NMTRERRIEANARERTRVHTISA 286
||.:..|: .:|:|.|:|.| ||.......|| ...::.|::.|.|||.|:|.::.
Frog 37 STQNDMLQ-KMSEEMLSKHG----SRGEGESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNL 96
Fly 287 AYETLRQAVPAYA---STQKLSKLSVLRVACSYILTLS-------RMAGEDYSADQS 333
|.:.||:.:| || |.:||||::.|.:|.:|||.|: |:.||.|....|
Frog 97 AMDGLREVMP-YAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHS 152
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
net | NP_001259789.1 |
HLH |
269..320 |
CDD:278439 |
23/53 (43%) |
olig3 | NP_001008191.1 |
bHLH_SF |
64..144 |
CDD:381792 |
27/80 (34%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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