DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment net and ato

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_731223.1 Gene:ato / 40975 FlyBaseID:FBgn0010433 Length:312 Species:Drosophila melanogaster


Alignment Length:237 Identity:59/237 - (24%)
Similarity:90/237 - (37%) Gaps:71/237 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 RYTSSADSAVVLTPPAID--SPPP-----NSCIPSTLRLQHEIMPNPAHIYVRHPGVTTLHRSLA 177
            :|....:.:||.|.|||.  |||.     :|.:.:...:.....|.|...|              
  Fly   106 QYGMIMEQSVVSTAPAIPVASPPAVEVMGSSNVGTCKTIPASAGPKPKRSY-------------- 156

  Fly   178 AHPEQLEPLALVTTKKQCVDQAGPKIEAFSALLIGKQPSAKKTL--KERTQKESTSSSFLEASL- 239
                        |.|.|      |...|.|......:.||...|  :|....:..:|:..:.|: 
  Fly   157 ------------TKKNQ------PSTTATSTPTAAAESSASVNLYTEEFQNFDFDNSALFDDSVE 203

  Fly   240 SDEDL----------------------NKTGLAPISRPHQHQRNYKNMT----RERRIEANARER 278
            .||||                      |:...|..|   ..:|..|.:|    |:||:.||||||
  Fly   204 DDEDLMLFSGGEDFDGNDGSFDLADGENQDAAAGGS---GKKRRGKQITPVVKRKRRLAANARER 265

  Fly   279 TRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTL 320
            .|:..::.|::.|||.:|...:.::|||...|::|.:||..|
  Fly   266 RRMQNLNQAFDRLRQYLPCLGNDRQLSKHETLQMAQTYISAL 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 25/63 (40%)
atoNP_731223.1 bHLH_TS_amos_like 250..311 CDD:381558 23/58 (40%)

Return to query results.
Submit another query.