DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and nhlh2

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_991232.1 Gene:nhlh2 / 402968 ZFINID:ZDB-GENE-040426-1809 Length:122 Species:Danio rerio


Alignment Length:145 Identity:36/145 - (24%)
Similarity:60/145 - (41%) Gaps:31/145 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 PEQLEP-LALVTTKKQCVDQAGPKIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDED 243
            |:|.:| |....:...|::..  |:|.     :..:|                   |||    :|
Zfish     5 PDQTDPDLTWTQSDTDCLNVM--KVEC-----VAHEP-------------------LEA----DD 39

  Fly   244 LNKTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLS 308
            .....|.|.:...:.:|..:..|.:.|.....|||.||...:.|:..||:.:|.....:||||:.
Zfish    40 GKTRALVPAALTREEKRRRRRATAKYRSAHATRERIRVEAFNVAFAELRKLLPTLPPDKKLSKIE 104

  Fly   309 VLRVACSYILTLSRM 323
            :||:|..||..|:.:
Zfish   105 ILRLAICYISYLNHV 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 21/62 (34%)
nhlh2NP_991232.1 bHLH_SF 50..122 CDD:469605 22/70 (31%)

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