DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment net and figla

DIOPT Version :9

Sequence 1:NP_001259789.1 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_944601.2 Gene:figla / 387259 ZFINID:ZDB-GENE-031121-1 Length:220 Species:Danio rerio


Alignment Length:75 Identity:25/75 - (33%)
Similarity:44/75 - (58%) Gaps:2/75 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 ERRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQ 332
            :||..|||:||.||.::::.:..||:.||.....:|.||:.:|:.|..||..||.:.  ::::|:
Zfish    66 KRRQLANAKERLRVRSLNSMFSYLRRIVPVMPRDRKPSKVDMLKAATEYIRLLSAVL--NHTSDK 128

  Fly   333 SVPSIATCLE 342
            ...:....||
Zfish   129 GNENANVFLE 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_001259789.1 HLH 269..320 CDD:278439 20/50 (40%)
figlaNP_944601.2 HLH 67..118 CDD:278439 20/50 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.