DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and HLH54F

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster


Alignment Length:112 Identity:35/112 - (31%)
Similarity:53/112 - (47%) Gaps:17/112 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 RTQKESTSSSFLEASLSDEDLNKTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAY 288
            |.::.|:.:.|.:....::..:::...|:      |||          .||||||.|:..:|:||
  Fly     3 RKKRSSSPTEFFDDDFDEDASSQSSQPPV------QRN----------AANARERMRMRVLSSAY 51

  Fly   289 ETLRQAVPAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQSVP 335
            ..|:..:|......|||||..||:|..||..|. .|.|..|..|:.|
  Fly    52 GRLKTKLPNIPPDTKLSKLDTLRLATLYIKQLI-TAVETGSHSQNHP 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 25/66 (38%)
HLH54FNP_477302.1 bHLH_TS_musculin_like 32..87 CDD:381429 26/65 (40%)

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