DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and HLH3B

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster


Alignment Length:171 Identity:43/171 - (25%)
Similarity:58/171 - (33%) Gaps:64/171 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 GKQPSAKKTLKERT-----QKESTSSSFLEASLSDEDLNKT--------------------GLAP 251
            |:.|.|  .|:..|     :.||.|....:|.|||..||.|                    ..:.
  Fly    51 GRHPPA--LLRHATPHLQPKTESISDGDGDAELSDFSLNDTEEDEEDLRDYIVLNGNQADANRSL 113

  Fly   252 ISRPHQHQRNYKNMTRE------------------------------------RRIEANARERTR 280
            .|.|..|.|| ..:|..                                    |::..|.|||.|
  Fly   114 SSSPRSHSRN-GLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERWR 177

  Fly   281 VHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTLS 321
            ...:|.|:..||:.||.:...:||||..:||.|..||..|:
  Fly   178 QQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLT 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 23/96 (24%)
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 22/53 (42%)

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