DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and twist2

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001005956.1 Gene:twist2 / 30395 ZFINID:ZDB-GENE-980526-235 Length:163 Species:Danio rerio


Alignment Length:104 Identity:33/104 - (31%)
Similarity:52/104 - (50%) Gaps:7/104 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 RTQKESTSSSFLEASLSDEDLNKTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAY 288
            |.:::...||  |.|.|...:||....|.....|.....:|    :|:.||.|||.|..:::.|:
Zfish    31 RKRRQGRKSS--EDSSSPSSVNKRNKKPSPSSTQSFEELQN----QRVLANVRERQRTQSLNEAF 89

  Fly   289 ETLRQAVPAYASTQKLSKLSVLRVACSYILTLSRMAGED 327
            .:||:.:|...| .||||:..|::|..||..|.::...|
Zfish    90 ASLRKIIPTLPS-DKLSKIQTLKLASRYIDFLCQVLQSD 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 23/66 (35%)
twist2NP_001005956.1 bHLH_TS_TWIST1 59..135 CDD:381418 24/74 (32%)

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