DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and Tcf15

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001162051.1 Gene:Tcf15 / 296272 RGDID:1308464 Length:195 Species:Rattus norvegicus


Alignment Length:127 Identity:37/127 - (29%)
Similarity:58/127 - (45%) Gaps:16/127 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 KERTQKESTSSSF-----LEASLSDEDLNKTGLAPISRPHQHQRNYKNMTRERRIEANARERTRV 281
            :.|::.:::..||     |||:       :.|..|.|...........:...:|..||||||.|.
  Rat    26 ENRSESDASDQSFGCCEGLEAA-------RRGPGPGSGRRASGGAGPVVVVRQRQAANARERDRT 83

  Fly   282 HTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQSVPSIATCLEA 343
            .:::.|:..||..:|.....:||||:..||:|.|||..|:.:.....:||...|    |..|
  Rat    84 QSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDAADDGQP----CFRA 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 23/66 (35%)
Tcf15NP_001162051.1 bHLH_TS_TCF15_paraxis 64..129 CDD:381476 23/64 (36%)

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