DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment net and hlh-19

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_508119.2 Gene:hlh-19 / 186449 WormBaseID:WBGene00001962 Length:111 Species:Caenorhabditis elegans


Alignment Length:83 Identity:29/83 - (34%)
Similarity:39/83 - (46%) Gaps:11/83 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 MTRERRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTLSRMAGEDY- 328
            |:|||   ||||||.|..:|..|:..||..:|.....:|.||...|:.|..||..|.|:..::. 
 Worm     1 MSRER---ANARERCRQKSIGNAFNMLRNHLPKQLRDRKPSKAETLKSAAQYISHLLRILEKEIE 62

  Fly   329 -------SADQSVPSIAT 339
                   ...|..||:.|
 Worm    63 NSSNNLKDEHQKDPSLTT 80

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 25/71 (35%)
hlh-19NP_508119.2 bHLH_TS_FIGLA 3..58 CDD:381428 24/57 (42%)

Return to query results.
Submit another query.