DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and hlh-16

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_492372.2 Gene:hlh-16 / 183973 WormBaseID:WBGene00001960 Length:146 Species:Caenorhabditis elegans


Alignment Length:118 Identity:29/118 - (24%)
Similarity:56/118 - (47%) Gaps:29/118 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 PHQHQRNYKNMTRERRIEA---------------------NARERTRVHTISAAYETLRQAVPAY 298
            |...:..::...|.:|.||                     |:|||.|:|.::..:||||:.:| |
 Worm     6 PPGAEEEFEPYVRRKRSEAGGRKKMQGLNEQEQNLLRNSINSRERRRMHELNDEFETLRECLP-Y 69

  Fly   299 ---ASTQKLSKLSVLRVACSYILTLS----RMAGEDYSADQSVPSIATCLEAV 344
               |:::::||.:.|.:|.::|..|:    ::..|...|:..:.|:...|:.|
 Worm    70 PNEANSRRMSKANTLLLASNWIKQLANANHKLQMELNMANAKIDSLMVQLKKV 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 24/94 (26%)
hlh-16NP_492372.2 bHLH_TS 42..96 CDD:381396 19/54 (35%)

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