DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and ngn-1

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_500236.1 Gene:ngn-1 / 177045 WormBaseID:WBGene00003595 Length:184 Species:Caenorhabditis elegans


Alignment Length:436 Identity:77/436 - (17%)
Similarity:134/436 - (30%) Gaps:159/436 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SPKPAAETGEENGVEEVSRIKLPSSVFASEFEEKDGLMKKAAEVTRGPRPDWD--PDVVAALDED 171
            |||.|...|::|...:::.:: .|:|      |::.|..:.|..|.|...:..  .:|...:|.:
 Worm   325 SPKAATIAGQKNSSTQLNGLR-DSTV------EEESLTNRGATGTNGLESESSHANNVEVNVDNE 382

  Fly   172 FDFNNPDNQLEDNFMELAMQPGAGGD---------------EDDDGE------DWFDE------- 208
            .|....|....|   |::||.....:               ||:.|:      :...|       
 Worm   383 RDLYKVDKLDSD---EISMQKTLRVEGLLDQTVGEMTKTKIEDETGQSTTIISECIPECEMQMKS 444

  Fly   209 ---EGGEHEFDSD-EMEGDYSDTEER--DGLGPLDDRYGREETKSRFTEYSMSSSVIRRNEQLTL 267
               |...|...:: :.:...|:||:|  |||..|::.             |...|::..|...||
 Worm   445 VKIENQSHRSTAEMQTKEKSSETEKRLQDGLVVLEND-------------SKVGSILSENPSSTL 496

  Fly   268 LDDRFEKFFEQYDDPEVGPLDC---------EEIEG--HVDPNDDVLLRCAAEFKRERDAVYDAE 321
            ...        .....|....|         .:||.  |...:|.|:|....|     ||:.:..
 Worm   497 CSG--------IPQASVDTSSCTVGNSLLSGTDIEALKHQPSSDAVMLDTVKE-----DAILEEA 548

  Fly   322 YEKQWIRERLTQLQDDNSEEEEVAMQVEDGEQKKWD---------------------------CE 359
            ...|..::|:.:|....:       .||..|:.:||                           |.
 Worm   549 RIIQAKKKRIAELSCGTA-------PVEVREKSQWDFVLEEMAWLANDFAQERLWKMTAAAQICH 606

  Fly   360 SILST----YSNIYNHPKLIQEPKKTRKILINPKTGLPENVLGAEGGKLTMKSIARLEQGGSEK- 419
            .:..|    :.....|.||    ||...:|.|.......:|.....|:|...|:..:::...|. 
 Worm   607 RVALTCQLRFEERNQHRKL----KKIASVLSNAILQFWSSVEAEVPGELEETSLGIVKETCQESN 667

  Fly   420 ---------------------------------PAGPKSLCDGSVI 432
                                             |:.|.::||..::
 Worm   668 CLNGRRCLAAGVKEYASRFLKYNNSSISYHSAAPSTPDNMCDPEIL 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 15/77 (19%)
ngn-1NP_500236.1 bHLH_SF 63..119 CDD:469605
Blue background indicates that the domain is not in the aligned region.

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