DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and hlh-4

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001379052.1 Gene:hlh-4 / 176372 WormBaseID:WBGene00001951 Length:205 Species:Caenorhabditis elegans


Alignment Length:84 Identity:32/84 - (38%)
Similarity:51/84 - (60%) Gaps:2/84 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 NARERTRVHTISAAYETLRQAVPAYAS-TQKLSKLSVLRVACSYILTLSRMAGEDYSADQSVPSI 337
            ||||||||||::.|:..|:|.:|:... |:::|||.:|..|.:||.||.::.....:..|||.| 
 Worm     9 NARERTRVHTVNQAFLVLKQHLPSLRQFTKRVSKLRILNAAITYIDTLLKLIQSSEAVPQSVIS- 72

  Fly   338 ATCLEAVTSTIQTEGKVKR 356
            ||....|.:.::...|:.:
 Worm    73 ATLGPIVPTPVRAVHKISK 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 24/55 (44%)
hlh-4NP_001379052.1 bHLH_TS_ASCL 5..60 CDD:381424 24/50 (48%)

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