DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment net and Mesp2

DIOPT Version :9

Sequence 1:NP_001259789.1 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_032615.2 Gene:Mesp2 / 17293 MGIID:1096325 Length:370 Species:Mus musculus


Alignment Length:124 Identity:39/124 - (31%)
Similarity:55/124 - (44%) Gaps:30/124 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 QKESTSSSFLEASLSDEDLNKTGLAP---ISRPHQ----------HQRNYKNMTRE-----RRIE 272
            |.:|||    .||.||    .:|..|   ..||.|          .|......||.     :|..
Mouse    27 QSDSTS----PASSSD----SSGSCPCYATRRPSQPAGPARSTRTTQATAPRRTRPAPAGGQRQS 83

  Fly   273 ANARERTRVHTISAAYETLRQAVPAYAST--QKLSKLSVLRVACSYILTLSRMAG--ED 327
            |:.||:.|:.|::.|.:.||:.:|...:.  |.|:|:..||:|..||..||.:.|  ||
Mouse    84 ASEREKLRMRTLARALQELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSALLGLSED 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_001259789.1 HLH 269..320 CDD:278439 18/52 (35%)
Mesp2NP_032615.2 HLH 80..133 CDD:278439 18/52 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.