DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment net and LOC1281434

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_321345.4 Gene:LOC1281434 / 1281434 VectorBaseID:AGAMI1_009491 Length:308 Species:Anopheles gambiae


Alignment Length:346 Identity:70/346 - (20%)
Similarity:127/346 - (36%) Gaps:94/346 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NTNTEKLYMQLSASELSAIIMKDSPNSNDRDAGFCSASSESEGGDDLVVEHARSGSPD--IRPKG 65
            |...|:|.:..|.:|.|.:....|..||       :.::.|....:||   |:|.:|:  |.|..
Mosquito    24 NVKMEQLEVPSSLAESSYLNSNYSYASN-------TVTTTSANNTNLV---AQSAAPNVVILPGF 78

  Fly    66 TDSADSKPIALVRNKRKSSEPFKVVGLTTPNSKSMPGPPSSASMN------ATGPLKKRIRYTSS 124
            .|:                         .|:|...|.|.|..|.:      |..|.:..:.....
Mosquito    79 MDN-------------------------YPDSWMTPSPSSFGSESPDYYSLANSPQRSFVDVEEY 118

  Fly   125 ADSAVVL---TPPAIDSPPPNSCIPSTLRLQHEIMPNP----AHIYVRHPGVTTLHRSLAAHPEQ 182
            .::.:.:   .|..:.|..|::.:|        :.|.|    |.:...||.....:.|       
Mosquito   119 KENLMAMQQQKPSQLPSLLPSAILP--------LSPPPPAPLATVQSVHPASNGCNTS------- 168

  Fly   183 LEPLALVTTKKQCVDQAGPKIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDEDL--- 244
             .|...:..||:               ...::|.||.......:.::||.:.|......:.|   
Mosquito   169 -PPTTNLPVKKR---------------QYNRKPKAKPEPPSGAETDATSRADLSCLTFPKSLFPR 217

  Fly   245 ----------NKTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVPAYA 299
                      ..||...:....:.::....:.::||:.||||||.|:..::.|::.|||.:|:..
Mosquito   218 AADPNNVHSEGTTGAVGVIGKRKRKQVPPQIKKKRRLAANARERKRMQNLNDAFDRLRQYLPSLG 282

  Fly   300 STQKLSKLSVLRVACSYILTL 320
            :.::|||...|::|.:||..|
Mosquito   283 NDRQLSKHETLQMAQTYITAL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 22/59 (37%)
LOC1281434XP_321345.4 None

Return to query results.
Submit another query.