DRSC/TRiP Functional Genomics Resources

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Protein Alignment net and Ferd3l

DIOPT Version :10

Sequence 1:NP_524820.2 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_277057.1 Gene:Ferd3l / 114712 MGIID:2150010 Length:168 Species:Mus musculus


Alignment Length:163 Identity:39/163 - (23%)
Similarity:76/163 - (46%) Gaps:20/163 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 LAAHPEQ---------LEPLALVTTKKQCVDQAGPKIEAFSALLIG---KQPSAKKTLKERTQK- 227
            :||:||.         :..|:|.:.:...:.:..|.: .|....:|   .:|.......||.|: 
Mouse     1 MAAYPESCLDATVLNFVADLSLASPRHPLLCEFPPGV-PFGDRTLGYREGRPGRLSQFDERYQEV 64

  Fly   228 ESTSSSFLEASLSDEDLNKTG--LAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYET 290
            |.....:.:....:|:....|  .:.:.||    :..:.:|..:|..||.|||.|:..::.|::.
Mouse    65 EGDEVEYEDPEEEEEEGEGRGRVASLLGRP----KRKRVITYAQRQAANIRERKRMFNLNEAFDQ 125

  Fly   291 LRQAVPAYASTQKLSKLSVLRVACSYILTLSRM 323
            ||:.||.:|..::||::..||:|..||..::.:
Mouse   126 LRRKVPTFAYEKRLSRIETLRLAIVYISFMTEL 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_524820.2 bHLH_TS_ATOH8 262..329 CDD:381427 21/62 (34%)
Ferd3lNP_277057.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..88 3/22 (14%)
bHLH_TS_FERD3L_NATO3 96..159 CDD:381421 21/63 (33%)
bHLH domain 104..159 20/55 (36%)

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