DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment net and LOC100489188

DIOPT Version :9

Sequence 1:NP_001259789.1 Gene:net / 45339 FlyBaseID:FBgn0002931 Length:360 Species:Drosophila melanogaster
Sequence 2:XP_017953149.1 Gene:LOC100489188 / 100489188 -ID:- Length:170 Species:Xenopus tropicalis


Alignment Length:118 Identity:35/118 - (29%)
Similarity:58/118 - (49%) Gaps:14/118 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 KKTLKERTQKESTSSSF-------------LEASLSDEDLNKTGL-APISRPHQHQRNYKNMTRE 268
            :.|.:..::.||.:..|             |...:|:..|...|| |.::...|.:...:...:.
 Frog    19 ESTFQLHSEPESCTMDFFPAVTEHVPAWPALSQVVSEVPLQLAGLGAEMNSSFQEESLMEGPCKV 83

  Fly   269 RRIEANARERTRVHTISAAYETLRQAVPAYASTQKLSKLSVLRVACSYILTLS 321
            .|..||.|||.|:.:|::|:|.||..||.:...::|||:..||:|.:||..||
 Frog    84 HRQAANIRERRRMLSINSAFEELRGRVPTFPYEKRLSKIDTLRLAIAYIALLS 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
netNP_001259789.1 HLH 269..320 CDD:278439 22/50 (44%)
LOC100489188XP_017953149.1 bHLH_TS_ceHLH13_like 80..142 CDD:381422 24/57 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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